Evidence map›Paper›PMID 39907792›Full record

ArticleMammalian genome : official journal of the International Mammalian Genome Society2025

Establishing the hybrid rat diversity program: a resource for dissecting complex traits.

M R Dwinell, A Takizawa, M Tutaj, L Malloy, R Schilling, A Endsley, W M Demos, J R Smith, S J Wang, J De Pons and 3 more

Abstract read
In one paragraph

Article in Mammalian genome : official journal of the International Mammalian Genome Society, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Genome-wide association mapping and targeted loss of function studies identifyProceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  2. Article
  3. Article
  4. Article
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

M R DwinellDepartment of Physiology, Medical College of Wisconsin, Milwaukee, WI, USA. mrdwinel@mcw.edu.ORCID 0000-0002-9528-3618
A TakizawaDepartment of Physiology, Medical College of Wisconsin, Milwaukee, WI, USA.ORCID 0000-0001-9101-5512
M TutajDepartment of Physiology, Medical College of Wisconsin, Milwaukee, WI, USA.ORCID 0000-0002-0378-4002
L MalloyDepartment of Physiology, Medical College of Wisconsin, Milwaukee, WI, USA.
R SchillingDepartment of Physiology, Medical College of Wisconsin, Milwaukee, WI, USA.ORCID 0000-0002-2691-0681
A EndsleyDepartment of Physiology, Medical College of Wisconsin, Milwaukee, WI, USA.
W M DemosDepartment of Physiology, Medical College of Wisconsin, Milwaukee, WI, USA.ORCID 0000-0002-8037-076X
J R SmithDepartment of Physiology, Medical College of Wisconsin, Milwaukee, WI, USA.ORCID 0000-0002-6443-9376
S J WangDepartment of Physiology, Medical College of Wisconsin, Milwaukee, WI, USA.ORCID 0000-0001-5256-8683
J De PonsDepartment of Physiology, Medical College of Wisconsin, Milwaukee, WI, USA.ORCID 0000-0001-7783-1556
A KundurthiDepartment of Physiology, Medical College of Wisconsin, Milwaukee, WI, USA.
A M GeurtsDepartment of Physiology, Medical College of Wisconsin, Milwaukee, WI, USA.ORCID 0000-0002-4347-2505
A E KwitekDepartment of Physiology, Medical College of Wisconsin, Milwaukee, WI, USA.ORCID 0000-0003-1024-4116

Funding

RAT GENOME DATABASER01HL064541 · NHLBI · MEDICAL COLLEGE OF WISCONSIN · PI ANNE E. KWITEK · 1999 to 2026
$50.0M
Hybrid Rat Diversity Program - Import of HXB/BXH panelR24OD024617 · OD · MEDICAL COLLEGE OF WISCONSIN · PI DWINELL, MELINDA R · 2018 to 2025
$6.8M
NHLBI NIH HHS R01 HL064541NHLBI NIH HHS R01HL064541NIH HHS R24 OD024617NIH Office of the Director R24OD024617
6 · The paper itself

Abstract

Rat models have been a major model for studying complex disease mechanisms, behavioral phenotypes, environmental factors, and for drug development and discovery. Inbred rat strains control for genetic background and allow for repeated, reproducible, cellular and whole animal phenotyping. The Hybrid Rat Diversity Panel (HRDP) was designed to be a powerful panel of inbred rats with genomic, physiological, and behavioral data to serve as a resource for systems genetics. The HRDP consists of 96-98 inbred rat strains aimed to maximize power to detect specific genetic loci associated with complex traits while maximizing the genetic diversity among strains. The panel consists of 32-34 genetically diverse inbred strains and two panels of recombinant inbred panels. To establish the HRDP program, embryo resuscitation and breeding were done to establish colonies for distribution. Whole genome sequencing was performed to achieve 30X coverage. Genomic, phenotype, and strain information is available through the Hybrid Rat Diversity Panel Portal at the Rat Genome Database ( http://rgd.mcw.edu ).

Indexed as

Genetic VariationAnimalsBreedingDatabases, GeneticGenomeGenomicsMalePhenotypeQuantitative Trait LociRatsRats, Inbred Strains

Identifiers

PMID39907792
PMCPMC11880076

What Socratic holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.