Evidence map›Paper›PMID 39910908›Full record

ArticleDisease models & mechanisms2025

Notch3 deletion regulates HIV-1 gene expression and systemic inflammation to ameliorate chronic kidney disease.

Mackenzie Thornton, Nicole Sommer, Mercedes McGonigle, Anil Kumar Ram, Sireesha Yerrathota, Henrietta Ehirim, Aakriti Chaturvedi, Johnny Dinh Phan, Anubhav Chakraborty, V Praveen Chakravarthi and 10 more

Abstract read
In one paragraph

Article in Disease models & mechanisms, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

20 authors.

Mackenzie ThorntonDepartment of Internal Medicine, University of Kansas Medical Center, Kansas City, KS 66160, USA.
Nicole SommerDepartment of Internal Medicine, University of Kansas Medical Center, Kansas City, KS 66160, USA.
Mercedes McGonigleDepartment of Internal Medicine, University of Kansas Medical Center, Kansas City, KS 66160, USA.
Anil Kumar RamDepartment of Internal Medicine, University of Kansas Medical Center, Kansas City, KS 66160, USA.
Sireesha YerrathotaDepartment of Internal Medicine, University of Kansas Medical Center, Kansas City, KS 66160, USA.
Henrietta EhirimDepartment of Internal Medicine, University of Kansas Medical Center, Kansas City, KS 66160, USA.
Aakriti ChaturvediDepartment of Internal Medicine, University of Kansas Medical Center, Kansas City, KS 66160, USA.
Johnny Dinh PhanDepartment of Internal Medicine, University of Kansas Medical Center, Kansas City, KS 66160, USA.
Anubhav ChakrabortyDepartment of Internal Medicine, University of Kansas Medical Center, Kansas City, KS 66160, USA.
V Praveen ChakravarthiDepartment of Pathology and Laboratory Medicine, University of Kansas Medical Center, Kansas City, KS 66160, USA.
Sumedha GunewardenaDepartment of Cell Biology and Physiology, University of Kansas Medical Center, Kansas City, KS 66160, USA.
Mudit TyagiDepartment of Medicine, Center for Translational Medicine, Thomas Jefferson University, Philadelphia, PA 19107, USA.
Jaya TalrejaDivision of Pulmonary, Critical Care and Sleep Medicine, Wayne State University School of Medicine and Detroit Medical Center, Detroit, MI 48201, USA.
Tao WangDepartment of Biology, Medicine and Health, The University of Manchester, Manchester M13 9PT, UK.
Pravin SinghalInstitute of Molecular Medicine, Feinstein Institute for Medical Research, Zucker School of Medicine at Hofstra-Northwell, New York, NY 11021, USA.
Pamela V TranDepartment of Cell Biology and Physiology, University of Kansas Medical Center, Kansas City, KS 66160, USA.
Timothy A FieldsDepartment of Pathology and Laboratory Medicine, University of Kansas Medical Center, Kansas City, KS 66160, USA.
Patricio E RayChild Health Research Center and Department of Pediatrics, University of Virginia School of Medicine, Charlottesville, VA 22903, USA.
Navneet K DhillonDepartment of Internal Medicine, University of Kansas Medical Center, Kansas City, KS 66160, USA.
Madhulika SharmaDepartment of Internal Medicine, University of Kansas Medical Center, Kansas City, KS 66160, USA.ORCID 0000-0001-7488-5444

Funding

Mentoring CoreP20GM103418 · NIGMS · UNIVERSITY OF KANSAS MEDICAL CENTER · PI Douglas E Wright · 2012 to 2026
$63.0M
RADx-UP: Improving the Response of Local Urban and Rural Communities to Disparities in Covid-19 TestingUL1TR002366 · NCATS · UNIVERSITY OF KANSAS MEDICAL CENTER · PI Mario Castro, JAMES STEVEN LEEDER · 2017 to 2026
$44.3M
Role of bFGF low affinity receptors in childhood HIVANR01DK049419 · NIDDK · UNIVERSITY OF VIRGINIA · PI PATRICIO E. RAY · 1994 to 2026
$7.4M
Using PCORnet to Expand the DS-CONNECT Cohort Through Healthcare System Recruitment, Incorporating Electronic Health Records, and Assessing Self-DeterminationU54HD090216 · NICHD · UNIVERSITY OF KANSAS LAWRENCE · PI HOFFMAN, LESA R · 2016 to 2020
$6.2M
Molecular Regulation of Cell Development and Differentiation Phase III COBREP30GM122731 · NIGMS · UNIVERSITY OF KANSAS MEDICAL CENTER · PI ABRAHAMSON, DALE R · 2017 to 2021
$5.6M
Role of cytokines and APOL-1 in the pathogenesis of childhood HIV associated nephrologyR01DK103564 · NIDDK · UNIVERSITY OF VIRGINIA · PI RAY, PATRICIO E. · 2014 to 2023
$3.0M
Drug abuse and HIV-associated pulmonary vascular injuryR01HL152832 · NHLBI · UNIVERSITY OF KANSAS MEDICAL CENTER · PI DHILLON, NAVNEET KAUR · 2021 to 2024
$2.8M
Pathogenesis of renal injury and hypertension in HIV+ childrenR01DK136417 · NIDDK · UNIVERSITY OF VIRGINIA · PI PATRICIO E. RAY · 2023 to 2026
$2.6M
Novel mechanisms and Drosophila model of APOL1-HIV-1 nephropathies in childrenR01DK115968 · NIDDK · UNIVERSITY OF VIRGINIA · PI HAN, ZHE, RAY, PATRICIO E. · 2018 to 2022
$2.3M
Characterization of cocaine induced signaling pathways that enhances HIV transcriptionR01DA041746 · NIDA · THOMAS JEFFERSON UNIVERSITY · PI TYAGI, MUDIT · 2017 to 2023
$2.3M
Diffuse optical spectroscopies to assess cerebral hemodynamics in pediatric sickle cell diseaseR01HL152322 · NHLBI · EMORY UNIVERSITY · PI BUCKLEY, ERIN MCGUIRE, GEE, BEATRICE E · 2021 to 2024
$2.0M
Implications of Notch signaling in HIV associated nephropathyR01DK108433 · NIDDK · UNIVERSITY OF KANSAS MEDICAL CENTER · PI SHARMA, MADHULIKA · 2015 to 2019
$743k
National Institute of Mental Health and Neurosciences MH126998NCATS NIH HHS UL1 TR002366NHLBI NIH HHS HL1528322NHLBI NIH HHS R01 HL152322NHLBI NIH HHS R01 HL152832NHLBI NIH HHS R01 HL1528322NIAAA NIH HHS DA041746NICHD NIH HHS U54 HD090216NIDA NIH HHS R01 DA041746NIDDK NIH HHS R01 DK049419NIDDK NIH HHS R01 DK103564NIDDK NIH HHS R01 DK108433NIDDK NIH HHS R01DK108433NIDDK NIH HHS R01 DK115968NIDDK NIH HHS R01 DK136417NIGMS NIH HHS P20 GM103418NIGMS NIH HHS P20GM103418NIGMS NIH HHS P30 GM122731NIH HHS S10 OD021743NIMH NIH HHS R21 MH126998University of Kansas Medical Center
6 · The paper itself

Abstract

Anti-retroviral therapy (ART) has decreased human immunodeficiency virus (HIV)-1-associated morbidity. However, despite ART, immune cells remain latently infected, leading to chronic inflammation and HIV-1-associated comorbidities. New strategies are needed to target viral proteins and inflammation. We found activation of Notch3 in renal cells of the HIV-1 transgenic mouse model (HIV-Tg26) and in patients with HIV-associated nephropathy. We hypothesized that targeting NOTCH3 activation constitutes an effective therapy for HIV-related chronic kidney disease. We generated HIV-Tg26 mice with Notch3 knocked out (Tg-N3KO). Compared to HIV-Tg26 mice at 3 months, Tg-N3KO mice showed a marked reduction in renal injury, skin lesions and mortality rate. They also showed reduced renal infiltrating cells and significantly reduced expression of HIV genes. Moreover, Notch3 activated the HIV long terminal repeat promoter, and induction of HIV-1 increased Notch3 activation, indicating a feedback mechanism. Further, bone marrow-derived macrophages from HIV-Tg26 mice showed activation of Notch3, indicating systemic effects. Consistent with that observation, systemic levels of TNF and MCP-1 were reduced in Tg-N3KO compared to HIV-Tg26 mice. Thus, Notch3 deletion/inhibition has a dual-therapeutic effect in HIV-related chronic kidney disease, which might extend to other HIV-related pathologies.

Indexed as

Gene DeletionGene Expression RegulationHIV-1InflammationReceptor, Notch3Renal Insufficiency, ChronicAIDS-Associated NephropathyAnimalsChemokine CCL2HIV InfectionsHumansKidneyMacrophagesMiceMice, KnockoutMice, TransgenicChemokine CCL2Notch3 protein, mouseReceptor, Notch3HIV-1KidneyNotch3

Identifiers

PMID39910908
PMCPMC11892680

What Socratic holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.