Evidence map›Paper›PMID 39913007›Full record

ArticleBulletin of mathematical biology2025

Employing Observability Rank Conditions for Taking into Account Experimental Information a priori.

Alejandro F Villaverde

Abstract read
In one paragraph

Article in Bulletin of mathematical biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

1 author.

Alejandro F VillaverdeCITMAga, 15782, Santiago de Compostela, Galicia, Spain. afvillaverde@uvigo.gal.ORCID https://orcid.org/0000-0001-7401-7380

Funding

Ministerio de ciencia e innovación RYC-2019-027537-IMinisterio de ciencia, innovación y universidades PID2023-146275NB-C21
6 · The paper itself

Abstract

The concept of identifiability describes the possibility of inferring the parameters of a dynamic model by observing its output. It is common and useful to distinguish between structural and practical identifiability. The former property is fully determined by the model equations, while the latter is also influenced by the characteristics of the available experimental data. Structural identifiability can be determined by means of symbolic computations, which may be performed before collecting experimental data, and are hence sometimes called a priori analyses. Practical identifiability is typically assessed numerically, with methods that require simulations-and often also optimization-and are applied a posteriori. An approach to study structural local identifiability is to consider it as a particular case of observability, which is the possibility of inferring the internal state of a system from its output. Thus, both properties can be analysed jointly, by building a generalized observability matrix and computing its rank. The aim of this paper is to investigate to which extent such observability-based methods can also inform about practical aspects related with the experimental setup, which are usually not approached in this way. To this end, we explore a number of possible extensions of the rank tests, and discuss the purposes for which they can be informative as well as others for which they cannot.

Indexed as

Models, BiologicalAlgorithmsComputer SimulationHumansMathematical ConceptsSystems BiologyDifferential geometryDynamic modellingIdentifiabilityObservability

Identifiers

PMID39913007
PMCPMC11802610

What Socratic holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.