Evidence map›Paper›PMID 39920307›Full record

ArticleNature plants2025

ATG8ylation of vacuolar membrane protects plants against cell wall damage.

Jose Julian, Peng Gao, Alessia Del Chiaro, Juan Carlos De La Concepcion, Laia Armengot, Marc Somssich, Heloise Duverge, Marion Clavel, Nenad Grujic, Roksolana Kobylinska and 10 more

Abstract read
In one paragraph

Article in Nature plants, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Review
  2. Review
  3. Article
  4. ATG16L1 controls mammalian vacuolar proton ATPase.The Journal of cell biology · 2025
    Article
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors.

Jose Julian *Gregor Mendel Institute, Austrian Academy of Sciences, Vienna BioCenter, Vienna, Austria. jose.valenzuela@gmi.oeaw.ac.at.ORCID 0000-0002-3078-0971
Peng Gao *Gregor Mendel Institute, Austrian Academy of Sciences, Vienna BioCenter, Vienna, Austria.ORCID 0000-0001-6633-0967
Alessia Del Chiaro *Gregor Mendel Institute, Austrian Academy of Sciences, Vienna BioCenter, Vienna, Austria.
Juan Carlos De La ConcepcionGregor Mendel Institute, Austrian Academy of Sciences, Vienna BioCenter, Vienna, Austria.
Laia ArmengotCentre for Research in Agricultural Genomics, CSIC-IRTA-UAB-UB, Bellaterra, Spain.
Marc SomssichMax Planck Institute for Plant Breeding Research, Cologne, Germany.ORCID 0000-0001-5092-6168
Heloise DuvergeGregor Mendel Institute, Austrian Academy of Sciences, Vienna BioCenter, Vienna, Austria.ORCID 0009-0008-2575-872X
Marion ClavelGregor Mendel Institute, Austrian Academy of Sciences, Vienna BioCenter, Vienna, Austria.ORCID 0000-0003-1322-7362
Nenad GrujicGregor Mendel Institute, Austrian Academy of Sciences, Vienna BioCenter, Vienna, Austria.
Roksolana KobylinskaGregor Mendel Institute, Austrian Academy of Sciences, Vienna BioCenter, Vienna, Austria.
Ingo PolivkaInstitute of Organic Chemistry, University of Vienna, Vienna, Austria.
Maarten BestenLaboratory of Biochemistry, Wageningen University & Research, Wageningen, the Netherlands.ORCID 0000-0001-5823-2320
Tonni Grube AndersenMax Planck Institute for Plant Breeding Research, Cologne, Germany.ORCID 0000-0002-8905-0850
Christian DankInstitute of Organic Chemistry, University of Vienna, Vienna, Austria.ORCID 0000-0001-7440-4153
Barbara KorbeiDepartment of Applied Genetics and Cell Biology, Institute of Molecular Plant Biology, BOKU University, Vienna, Austria.ORCID 0000-0002-0439-0435
Andreas BachmairMax Perutz Labs, Department of Biochemistry and Cell Biology, University of Vienna, Vienna, Austria.ORCID 0000-0001-7731-1841
Nuria S CollCentre for Research in Agricultural Genomics, CSIC-IRTA-UAB-UB, Bellaterra, Spain.ORCID 0000-0002-8889-0399
Elena A MininaDepartment of Molecular Sciences, Uppsala BioCenter, Swedish University of Agricultural Sciences and Linnean Center for Plant Biology, Uppsala, Sweden.ORCID 0000-0002-2619-1859
Joris SprakelLaboratory of Biochemistry, Wageningen University & Research, Wageningen, the Netherlands.
Yasin DagdasGregor Mendel Institute, Austrian Academy of Sciences, Vienna BioCenter, Vienna, Austria. yasin.dagdas@gmi.oeaw.ac.at.ORCID 0000-0002-9502-355X

Funding

Austrian Science Fund (Fonds zur Förderung der Wissenschaftlichen Forschung) ESP 580Austrian Science Fund (Fonds zur Förderung der Wissenschaftlichen Forschung) P32355Austrian Science Fund (Fonds zur Förderung der Wissenschaftlichen Forschung) P34944EC | EU Framework Programme for Research and Innovation H2020 | H2020 Priority Excellent Science | H2020 European Research Council (H2020 Excellent Science - European Research Council) Project number: 101043370EC | Horizon 2020 Framework Programme (EU Framework Programme for Research and Innovation H2020) Marie Curie Fellowship Project number: 101107472EC | Horizon 2020 Framework Programme (EU Framework Programme for Research and Innovation H2020) Marie Curie VIP2 ProgramEC | Horizon 2020 Framework Programme (EU Framework Programme for Research and Innovation H2020) project number: 101000981Vienna Science and Technology Fund (Wiener Wissenschafts-, Forschungs- und Technologiefonds) LS21-009
6 · The paper itself

Abstract

Vacuoles are essential for cellular metabolism and growth and the maintenance of internal turgor pressure. They sequester lytic enzymes, ions and secondary metabolites that, if leaked into the cytosol, could lead to cell death. Despite their pivotal roles, quality control pathways that safeguard vacuolar integrity have remained elusive in plants. Here we describe a conserved vacuolar quality control pathway that is activated upon cell wall damage in a turgor-pressure-dependent manner. Cell wall perturbations induce a distinct modification-ATG8ylation-on the vacuolar membrane (tonoplast) that is regulated by the V-ATPase and ATG8 conjugation machinery. Genetic disruption of tonoplast ATG8ylation impairs vacuolar integrity, leading to cell death. Together, our findings reveal a homeostatic pathway that preserves vacuolar integrity upon cell wall damage.

Indexed as

ArabidopsisArabidopsis ProteinsAutophagy-Related Protein 8 FamilyCell WallIntracellular MembranesVacuolesVacuolar Proton-Translocating ATPasesArabidopsis ProteinsATG8 protein, ArabidopsisAutophagy-Related Protein 8 FamilyVacuolar Proton-Translocating ATPases

Identifiers

PMID39920307
PMCPMC11842276

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.