Evidence map›Paper›PMID 39948360›Full record

ArticleNature communications2025

Bacteria encode post-mortem protein catabolism that enables altruistic nutrient recycling.

Savannah E R Gibson, Isabella Frost, Stephen J Hierons, Tessa Moses, Wilson C K Poon, Stuart A West, Martin J Cann

Abstract read
In one paragraph

Article in Nature communications, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Savannah E R GibsonDepartment of Biosciences, Durham University, South Road, Durham, DH1 3LE, UK.
Isabella FrostDepartment of Biosciences, Durham University, South Road, Durham, DH1 3LE, UK.
Stephen J HieronsDepartment of Biosciences, Durham University, South Road, Durham, DH1 3LE, UK.
Tessa MosesEdinOmics, RRID:SCR_021838, School of Biological Sciences, The University of Edinburgh, Max Born Crescent, Edinburgh, EH9 3BF, UK.ORCID http://orcid.org/0000-0001-9366-4727
Wilson C K PoonSchool of Physics and Astronomy, The University of Edinburgh, Peter Guthrie Tait Road, Edinburgh, EH9 3FD, UK.
Stuart A WestDepartment of Biology, University of Oxford, 11A Mansfield Road, Oxford, OX1 3SZ, UK.ORCID http://orcid.org/0000-0003-2152-3153
Martin J CannDepartment of Biosciences, Durham University, South Road, Durham, DH1 3LE, UK. m.j.cann@durham.ac.uk.ORCID http://orcid.org/0000-0001-6305-8769

Funding

European Research Council 834164
6 · The paper itself

Abstract

Bacterial death is critical in nutrient recycling. However, the underlying mechanisms that permit macromolecule recycling after bacterial death are largely unknown. We demonstrate that bacteria encode post-mortem protein catabolism via Lon protease released from the dead bacteria. Growth assays reveal that the lysate of Lon protease-null bacteria does not provide a growth benefit to wild type cells. This deficiency is reversed with exogenous recombinant Lon protease, confirming its post-mortem role and is independent of Lon ATPase activity. Biochemistry, growth assays and metabolomics demonstrate that Lon protease facilitates peptide nutrient release, benefitting living cells and acting as a cooperative public good. We also show that the production of Lon protease cannot be explained by a personal benefit to living cells. Although Lon protease can also provide a benefit to living cells under stressful conditions by helping control protein quality, this private benefit does not outweigh the cost under the conditions examined. These results suggest that Lon protease represents a post-mortem adaptation that can potentially be explained by considering the post-mortem indirect benefit to other cells (kin selection). This discovery highlights an unexpected post-mortem biochemistry, reshaping our understanding of nutrient recycling.

Indexed as

Bacterial ProteinsEscherichia coliNutrientsProtease LaBacterial ProteinsNutrientsProtease La

Identifiers

PMID39948360
PMCPMC11825663

What Socratic holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.