Evidence map›Paper›PMID 39962045›Full record

ArticleNature communications2025

Copy number variants and the tangential expansion of the cerebral cortex.

Zhijie Liao, Kuldeep Kumar, Jakub Kopal, Guillaume Huguet, Zohra Saci, Martineau Jean-Louis, Zdenka Pausova, Igor Jurisica, Carrie E Bearden, IMAGEN Consortium and 3 more

Abstract read
In one paragraph

Article in Nature communications, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Genetic insights on the mechanisms of human cortical folding.bioRxiv : the preprint server for biology · 2026
    Article
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Zhijie LiaoCentre de Recherche du CHU Sainte-Justine, Montreal, QC, Canada.ORCID http://orcid.org/0000-0003-2351-0022
Kuldeep KumarCentre de Recherche du CHU Sainte-Justine, Montreal, QC, Canada.ORCID http://orcid.org/0000-0003-3313-135X
Jakub KopalDepartment of Biomedical Engineering, Faculty of Medicine, McGill University, Montreal, QC, Canada.
Guillaume HuguetCentre de Recherche du CHU Sainte-Justine, Montreal, QC, Canada.ORCID http://orcid.org/0000-0002-4746-6030
Zohra SaciCentre de Recherche du CHU Sainte-Justine, Montreal, QC, Canada.ORCID http://orcid.org/0000-0003-2788-1306
Martineau Jean-LouisCentre de Recherche du CHU Sainte-Justine, Montreal, QC, Canada.ORCID http://orcid.org/0000-0002-3305-3307
Zdenka PausovaCentre de Recherche du CHU Sainte-Justine, Montreal, QC, Canada.ORCID http://orcid.org/0000-0002-7784-1380
Igor JurisicaOsteoarthritis Research Program, Division of Orthopedic Surgery, Schroeder Arthritis Institute, and Data Science Discovery Centre for Chronic Diseases, Krembil Research Institute, University Health Network, Toronto, ON, Canada.ORCID http://orcid.org/0000-0002-2507-946X
Carrie E BeardenSemel Institute for Neuroscience and Human Behavior, Departments of Psychiatry and Biobehavioral Sciences and Psychology, University of California-Los Angeles, Los Angeles, CA, USA.ORCID http://orcid.org/0000-0002-8516-923X
IMAGEN Consortium
16p11.2 European Consortium
Sebastien JacquemontCentre de Recherche du CHU Sainte-Justine, Montreal, QC, Canada. sebastien.jacquemont@umontreal.ca.ORCID http://orcid.org/0000-0001-6838-8767
Tomas PausCentre de Recherche du CHU Sainte-Justine, Montreal, QC, Canada. tpausresearch@gmail.com.ORCID http://orcid.org/0000-0003-1495-9338

Funding

Training U54EB020403 · NIBIB · UNIVERSITY OF SOUTHERN CALIFORNIA · PI THOMPSON, PAUL M · 2014 to 2018
$10.1M
Neurodevelopment and Psychosis in the 22q11.2 Deletion SyndromeR01MH085953 · NIMH · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI BEARDEN, CARRIE E · 2010 to 2020
$6.2M
Integrative Molecular and Phenotype Analysis of 22q11.2 Deletion SyndromeR01MH100900 · NIMH · STANFORD UNIVERSITY · PI HALLMAYER, JOACHIM F · 2013 to 2017
$4.8M
Neurodevelopment and Psychosis in the 22q11.2 Copy Number VariantsR37MH085953 · NIMH · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI CARRIE E BEARDEN · 2023 to 2026
$2.9M
A decentralized macro and micro gene-by-environment interaction analysis of substance use behavior and its brain biomarkers R01DA049238 · NIDA · GEORGIA STATE UNIVERSITY · PI CALHOUN, VINCE D, LIU, JINGYU · 2019 to 2023
$2.9M
Understanding Rare Genetic Variation and Disease Risk: A Global Neurogenetics InitiativeR01MH129858 · NIMH · SAINTE-JUSTINE UNIVERSITY HOSPITAL CTR · PI CARRIE E BEARDEN, Sebastien Jacquemont · 2023 to 2026
$2.4M
Axon, Testosterone and Mental Health during AdolescenceR01MH085772 · NIMH · BAYCREST CENTRE FOR GERIATRIC CARE · PI PAUS, TOMAS · 2010 to 2014
$1.5M
ENIGMA World Aging CenterR56AG058854 · NIA · UNIVERSITY OF SOUTHERN CALIFORNIA · PI THOMPSON, PAUL M · 2018 to 2018
$683k
Integration of Five Large-Scale Neuropsychiatric Genetic Datasets under the RDoC FrameworkR03MH105808 · NIMH · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI BEARDEN, CARRIE E, FEARS, SCOTT C. · 2015 to 2016
$154k
Fondation Brain Canada (Fondation Neuro Canada) 159734Gouvernement du Canada | Instituts de Recherche en Santé du Canada | CIHR Skin Research Training Centre (Skin Research Training Centre) 159734NIA NIH HHS R56 AG058854NIBIB NIH HHS U54 EB020403NIDA NIH HHS R01 DA049238NIMH NIH HHS R01 MH085772NIMH NIH HHS R01 MH085953NIMH NIH HHS R01 MH100900NIMH NIH HHS R01 MH129858NIMH NIH HHS R03 MH105808NIMH NIH HHS R37 MH085953Wellcome Trust
6 · The paper itself

Abstract

The tangential expansion of the human cerebral cortex, indexed by its surface area (SA), occurs mainly during prenatal and early postnatal periods, and is influenced by genetic factors. Here we investigate the role of rare copy number variants (CNVs) in shaping SA, and the underlying mechanisms, by aggregating CNVs across the genome in community-based cohorts (N = 39,015). We reveal that genome-wide CNV deletions and duplications are associated with smaller SA. Subsequent analyses with gene expression in fetal cortex suggest that CNVs influence SA by interrupting the proliferation of neural progenitor cells during fetal development. Notably, the deletion of genes with strong (but not weak) coexpression with neural progenitor genes is associated with smaller SA. Follow up analyses reveal similar mechanisms at play in three clinical CNVs, 1q21.1, 16p11.2 and 22q11.2. Together, this study of rare CNVs expands our knowledge about genetic architecture of human cerebral cortex.

Indexed as

Cerebral CortexDNA Copy Number VariationsAdultChromosomes, Human, Pair 1Chromosomes, Human, Pair 16Chromosomes, Human, Pair 22FemaleGenome-Wide Association StudyHumansMaleNeural Stem Cells

Identifiers

PMID39962045
PMCPMC11833094

What Socratic holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.