Evidence map›Paper›PMID 39979293›Full record

ArticleNature communications2025

Bacteria invade the brain following intracortical microelectrode implantation, inducing gut-brain axis disruption and contributing to reduced microelectrode performance.

George F Hoeferlin, Sarah E Grabinski, Lindsey N Druschel, Jonathan L Duncan, Grace Burkhart, Gwendolyn R Weagraff, Alice H Lee, Christopher Hong, Meera Bambroo, Hannah Olivares and 16 more

Abstract read
In one paragraph

Article in Nature communications, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Review
  2. Review
  3. Article
  4. Ethical Precision in Nanoscale Brain Interfacing.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
    Article
  5. Article
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  10. Review
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

26 authors.

George F HoeferlinDepartment of Biomedical Engineering, Case Western Reserve University, Cleveland, OH, USA.ORCID http://orcid.org/0000-0002-5825-2820
Sarah E GrabinskiDepartment of Population and Quantitative Health Sciences, Case Western Reserve University, Cleveland, OH, USA.
Lindsey N DruschelDepartment of Biomedical Engineering, Case Western Reserve University, Cleveland, OH, USA.ORCID http://orcid.org/0000-0001-9457-1944
Jonathan L DuncanDepartment of Biomedical Engineering, Case Western Reserve University, Cleveland, OH, USA.
Grace BurkhartDepartment of Biomedical Engineering, Case Western Reserve University, Cleveland, OH, USA.ORCID http://orcid.org/0000-0002-4516-5963
Gwendolyn R WeagraffAdvanced Platform Technology Center, Louis Stokes Cleveland Department of Veterans Affairs Medical Center, Cleveland, OH, USA.ORCID http://orcid.org/0009-0004-9707-8097
Alice H LeeDepartment of Biomedical Engineering, Case Western Reserve University, Cleveland, OH, USA.
Christopher HongDepartment of Biomedical Engineering, Case Western Reserve University, Cleveland, OH, USA.
Meera BambrooDepartment of Biomedical Engineering, Case Western Reserve University, Cleveland, OH, USA.
Hannah OlivaresDepartment of Biomedical Engineering, Case Western Reserve University, Cleveland, OH, USA.
Tejas BajwaDepartment of Biomedical Engineering, Case Western Reserve University, Cleveland, OH, USA.
Jennifer ColemanDepartment of Biomedical Engineering, Case Western Reserve University, Cleveland, OH, USA.ORCID http://orcid.org/0009-0001-8931-7180
Longshun LiDepartment of Biomedical Engineering, Case Western Reserve University, Cleveland, OH, USA.ORCID http://orcid.org/0000-0003-2008-3571
William MembergDepartment of Biomedical Engineering, Case Western Reserve University, Cleveland, OH, USA.ORCID http://orcid.org/0000-0002-2545-8574
Jennifer SweetLouis Stokes Cleveland Department of Veterans Affairs Medical Center, Cleveland, OH, USA.
Hoda Amani HamedaniAdvanced Platform Technology Center, Louis Stokes Cleveland Department of Veterans Affairs Medical Center, Cleveland, OH, USA.ORCID http://orcid.org/0000-0001-7129-5019
Abhinav P AcharyaDepartment of Biomedical Engineering, Case Western Reserve University, Cleveland, OH, USA.ORCID http://orcid.org/0000-0002-9361-2764
Ana G Hernandez-ReynosoDepartment of Biomedical Engineering, Case Western Reserve University, Cleveland, OH, USA.
Curtis DonskeyLouis Stokes Cleveland Department of Veterans Affairs Medical Center, Cleveland, OH, USA.
George JaskiwLouis Stokes Cleveland Department of Veterans Affairs Medical Center, Cleveland, OH, USA.ORCID http://orcid.org/0000-0001-7168-0822
E Ricky ChanCleveland Institute for Computational Biology, Case Western Reserve University, Cleveland, OH, USA.ORCID http://orcid.org/0000-0001-9277-5329
Andrew J ShoffstallDepartment of Biomedical Engineering, Case Western Reserve University, Cleveland, OH, USA.ORCID http://orcid.org/0000-0002-0881-2180
A Bolu AjiboyeDepartment of Biomedical Engineering, Case Western Reserve University, Cleveland, OH, USA.
Horst A von RecumDepartment of Biomedical Engineering, Case Western Reserve University, Cleveland, OH, USA.ORCID http://orcid.org/0000-0002-9323-8100
Liangliang ZhangDepartment of Population and Quantitative Health Sciences, Case Western Reserve University, Cleveland, OH, USA. lxz716@case.edu.ORCID http://orcid.org/0000-0001-5986-2260
Jeffrey R CapadonaDepartment of Biomedical Engineering, Case Western Reserve University, Cleveland, OH, USA. jrc35@case.edu.ORCID http://orcid.org/0000-0001-8030-6947

Funding

Integrated Neural Engineering and Rehabilitation Training ProgramT32EB004314 · NIBIB · CASE WESTERN RESERVE UNIVERSITY · PI Jeffrey R Capadona, Robert F. Kirsch · 2004 to 2026
$6.1M
Case CCC Youth Engaged in Science, 09/01/2022-08/31/2027R25CA221718 · NCI · CASE WESTERN RESERVE UNIVERSITY · PI Jason Mears · 2017 to 2026
$4.4M
Deploying Intracortical Electrode Arrays to Record and Stimulate in a Tissue VolumeR01NS131502 · NINDS · TEXAS A&M UNIVERSITY · PI Taylor H Ware · 2023 to 2026
$1.9M
NCI NIH HHS R25 CA221718NIBIB NIH HHS T32 EB004314NINDS NIH HHS R01 NS131502
6 · The paper itself

Abstract

Brain-machine interface performance can be affected by neuroinflammatory responses due to blood-brain barrier (BBB) damage following intracortical microelectrode implantation. Recent findings suggest that certain gut bacterial constituents might enter the brain through damaged BBB. Therefore, we hypothesized that damage to the BBB caused by microelectrode implantation could facilitate microbiome entry into the brain. In our study, we found bacterial sequences, including gut-related ones, in the brains of mice with implanted microelectrodes. These sequences changed over time. Mice treated with antibiotics showed a reduced presence of these bacteria and had a different inflammatory response, which temporarily improved microelectrode recording performance. However, long-term antibiotic use worsened performance and disrupted neurodegenerative pathways. Many bacterial sequences found were not present in the gut or in unimplanted brains. Together, the current study established a paradigm-shifting mechanism that may contribute to chronic intracortical microelectrode recording performance and affect overall brain health following intracortical microelectrode implantation.

Indexed as

BacteriaBrainBrain-Computer InterfacesBrain-Gut AxisElectrodes, ImplantedGastrointestinal MicrobiomeAnimalsAnti-Bacterial AgentsBlood-Brain BarrierMaleMiceMice, Inbred C57BLMicroelectrodesAnti-Bacterial Agents

Identifiers

PMID39979293
PMCPMC11842729

What Socratic holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.