Evidence map›Paper›PMID 40010958›Full record

ArticleIn vivo (Athens, Greece)

Potential Common Molecular Mechanisms Between Periodontitis and Prostate Cancer: A Network Analysis of Differentially Expressed miRNAs.

Aylin Kanli, Deniz Sunnetci-Akkoyunlu, Nurhan Kulcu-Sarikaya, Cansu Ugurtaş, Gurler Akpinar, Murat Kasap

Abstract read
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Article in In vivo (Athens, Greece). The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Aylin KanliDepartment of Medical Biology, Kocaeli University Faculty of Medicine, Kocaeli, Turkiye; aylin.kanli@kocaeli.edu.tr.
Deniz Sunnetci-AkkoyunluDepartment of Medical Genetics, Kocaeli University Faculty of Medicine, Kocaeli, Turkiye.
Nurhan Kulcu-SarikayaDepartment of Medical Genetics, Kocaeli University Faculty of Medicine, Kocaeli, Turkiye.
Cansu UgurtaşDepartment of Medical Genetics, Kocaeli University Faculty of Medicine, Kocaeli, Turkiye.
Gurler AkpinarDepartment of Medical Biology, Kocaeli University Faculty of Medicine, Kocaeli, Turkiye.
Murat KasapDepartment of Medical Biology, Kocaeli University Faculty of Medicine, Kocaeli, Turkiye.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

BACKGROUND/

aimProstate cancer is the second leading cause of cancer-related deaths in men. Periodontitis is considered a high-risk factor for prostate cancer, but the genetic mechanism is unclear. This study aims to identify dysregulated miRNAs, their associated genes, signaling pathways, and compounds linking periodontitis to prostate cancer. MATERIALS AND

methodsThe miRNA expression datasets of prostate cancer and periodontitis were obtained from the GEO database. Differentially expressed miRNAs (DEmiRNAs) were identified, and common DEmiRNAs (Co-DEmiRNAs) between both datasets were determined. The Co-DEmiRNA-target network structure and functional analyses, including miRNet 2.0, were performed, encompassing Co-DEmiRNA-gene, Co-DEmiRNA-transcription factor (TF), and Co-DEmiRNA-compound networks. Functional enrichment analysis for Co-DEmiRNA genes and Co-DEmiRNA-TF networks was conducted using KEGG, Reactome pathways, and Gene Ontology (GO). Co-up and co-down DEmiRNAs were validated with TCGA miRNA-seq data.

resultshsa-mir-148a-3p, hsa-mir-148b-5p, and hsa-mir-623 are the top miRNA nodes in Co-DEmiRNA-Target networks. The most significant candidate miRNA dysregulation genes are POU2F1, TMOD3, SCD, PRRC2C, and MAT2A, while the most important dysregulation TF includes TP53, CREB1, DNMT1, E2F1, and EGR1. Arsenic trioxide, gemcitabine, and 1,2,6-tri-O-galloyl-beta-D-glucopyranose are the most correlated compounds. Functional analyses revealed multiple cell signaling pathways, such as NOTCH and CREB phosphorylation, and regulation of processes, such as RNA metabolism and transcription.

conclusionOur study suggests candidate molecular mechanisms linking periodontitis to prostate cancer, highlighting potential compounds targeting both diseases. These findings provide a foundation for guiding future basic and clinical research.

Indexed as

Gene Expression Regulation, NeoplasticGene Regulatory NetworksMicroRNAsPeriodontitisProstatic NeoplasmsBiomarkers, TumorComputational BiologyDatabases, GeneticGene Expression ProfilingGene OntologyHumansMaleSignal TransductionBiomarkers, TumorMicroRNAsgenetic crosstalkMicroRNAnetwork analysisperiodontitisProstate cancer

Identifiers

PMID40010958
PMCPMC11884493

What Socratic holds

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LicenceCC BY-NC-ND
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.