Evidence map›Paper›PMID 40045206›Full record

ArticleBMC plant biology2025

Genome-wide identification of the UGT genes family in Acer rubrum and role of ArUGT52 in anthocyanin biosynthesis under cold stress.

Khan Arif Kamal, Faheem Afzal Shah, Yue Zhao, Zhu Chen, Songling Fu, Zhiyong Zhu, Jie Ren, Hua Liu

Abstract read
In one paragraph

Article in BMC plant biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Khan Arif KamalSchool of Forestry & Landscape Architecture, Anhui Agricultural University, Hefei, Anhui, 230036, China.
Faheem Afzal ShahInstitute of Agricultural Engineering, Anhui Academy of Agricultural Sciences, Hefei, Anhui, 230031, China.
Yue ZhaoSchool of Forestry & Landscape Architecture, Anhui Agricultural University, Hefei, Anhui, 230036, China.
Zhu ChenInstitute of Agricultural Engineering, Anhui Academy of Agricultural Sciences, Hefei, Anhui, 230031, China.
Songling FuSchool of Forestry & Landscape Architecture, Anhui Agricultural University, Hefei, Anhui, 230036, China.
Zhiyong ZhuNingbo City College of Vocational Technology, Ningbo, 315502, China.
Jie RenInstitute of Agricultural Engineering, Anhui Academy of Agricultural Sciences, Hefei, Anhui, 230031, China. renjieaaas@sina.com.
Hua LiuSchool of Forestry & Landscape Architecture, Anhui Agricultural University, Hefei, Anhui, 230036, China. liuhuanmg@126.com.

Funding

National Natural Science Foundation of China 32271914Science and Technology Innovation 2025 Major Project of Ningbo Municipality 2019b10012
6 · The paper itself

Abstract

Acer rubrum is a widespread Acer species valued for its vibrant autumn foliage. The UGT (UDP-glycosyltransferase) gene family is integral to the biosynthesis of anthocyanins, the pigments responsible for leaf coloration. This study aimed to comprehensively identify and characterize the UGT gene family in the A. rubrum genome. The results of the phylogenetic analysis of 249 ArUGTs revealed 18 distinct subgroups. Conserved motif analysis demonstrated structural similarities within subgroups. Gene duplication analysis identified 21 tandem and 66 segmental duplication events across chromosomes. Transcriptomic data from autumn leaves of different colours and under low-temperature stress were analyzed for ArUGT expression patterns. Compared to controls, 44 UGTs were upregulated and 99 downregulated in yellow leaves, while 59 were upregulated and 84 downregulated in red leaves. Low-temperature treatments showed upregulation of 18 UGTs at 10 °C and 40 UGTs at 4 °C. Downregulation was observed in 7 UGTs at 10 °C and 33 UGTs at 4 °C. Among all UGT genes, ArUGT52 was common in highly expressed genes in both red leaf and low-temperature stress. Furthermore, the transient overexpression of ArUGT52 in tobacco plants demonstrated cytoplasmic localization and a marked increase in anthocyanin levels under cold stress. In vitro, biochemical assay results indicated that the ArUGT52 was involved in anthocyanin biosynthesis via the glucosylation of anthocyanidins. This study provides insights into the genetic mechanisms of leaf coloration and the potential of UGT manipulation for enhancing plant responses to low-temperature stress. These findings have applications in ornamental horticulture and agriculture.

Indexed as

AcerAnthocyaninsGlycosyltransferasesCold-Shock ResponseCold TemperatureGenes, PlantGenome-Wide Association StudyPhylogenyPlant ProteinsStress, PhysiologicalAnthocyaninsGlycosyltransferasesPlant ProteinsAcer rubrumAnthocyaninCold stressLeaf colourUDP-glycosyltransferase (UGTs)

Identifiers

PMID40045206
PMCPMC11881464

What Socratic holds

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LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.