Evidence map›Paper›PMID 40047849›Full record

ArticleAmerican journal of physiology. Heart and circulatory physiology2025

Whole genome transcriptomics reveal distinct atrial versus ventricular responses to neonatal hyperoxia.

E David Cohen, Min Yee, Kyle Roethlin, Irina Prelipcean, Eric M Small, George A Porter, Michael A O'Reilly

Abstract readComparative Study
In one paragraph

Article in American journal of physiology. Heart and circulatory physiology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Cannabidiol Protects the Neonatal Mouse Heart from Hyperoxia-Induced Injury.International journal of molecular sciences · 2025
    Article
  2. The vulnerable preterm heart: tale from the two chambers.American journal of physiology. Heart and circulatory physiology · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

E David CohenDepartment of Pediatrics, Division of Cardiology, School of Medicine and Dentistry, The University of Rochester, Rochester, New York, United States.ORCID 0000-0003-4914-880X
Min YeeDepartment of Pediatrics, Division of Neonatology, School of Medicine and Dentistry, The University of Rochester, Rochester, New York, United States.
Kyle RoethlinDepartment of Pediatrics, Division of Neonatology, School of Medicine and Dentistry, The University of Rochester, Rochester, New York, United States.
Irina PrelipceanDepartment of Pediatrics, Division of Cardiology, School of Medicine and Dentistry, The University of Rochester, Rochester, New York, United States.
Eric M SmallDepartment of Medicine, School of Medicine and Dentistry, The University of Rochester, Rochester, New York, United States.
George A PorterDepartment of Pediatrics, Division of Cardiology, School of Medicine and Dentistry, The University of Rochester, Rochester, New York, United States.ORCID 0000-0003-0726-9988
Michael A O'ReillyDepartment of Pediatrics, Division of Neonatology, School of Medicine and Dentistry, The University of Rochester, Rochester, New York, United States.ORCID 0000-0001-5094-696X

Funding

VISUAL INDICES OF NEUROTOXICITYP30ES001247 · NIEHS · UNIVERSITY OF ROCHESTER · PI Martha Susiarjo · 1985 to 2026
$42.8M
Institutional Career Development CoreKL2TR001999 · NCATS · UNIVERSITY OF ROCHESTER · PI XIAO, JIN · 2016 to 2024
$5.2M
Intercalated disc-nuclear lamina coupling as a molecular substrate for arrhythmogenic cardiomyopathyR01HL169961 · NHLBI · UNIVERSITY OF ROCHESTER · PI Eric M Small · 2023 to 2026
$2.7M
Dysregulation of common metabolic and transcriptional pathways in heart and lung fibrosisR01HL133761 · NHLBI · UNIVERSITY OF ROCHESTER · PI SMALL, ERIC M, WOELLER, COLLYNN FREMONT · 2016 to 2019
$2.1M
Defining how neonatal hyperoxia causes pulmonary hypertension in adultsR01HL168812 · NHLBI · UNIVERSITY OF ROCHESTER · PI Michael A O'Reilly · 2024 to 2026
$2.1M
Cyclophilin D Regulates Neonatal Cardiac Bioenergetics and FunctionR01HL144776 · NHLBI · UNIVERSITY OF ROCHESTER · PI PORTER, GEORGE A · 2019 to 2022
$2.0M
Coordination of inflammatory signaling and cardiac fibrosis by small proline rich proteinsR01HL144867 · NHLBI · UNIVERSITY OF ROCHESTER · PI SMALL, ERIC M · 2019 to 2022
$1.7M
Role of early life hyperoxia on mesenchymal stem cell fate: their impact on age related diseaseR21AG070585 · NIA · UNIVERSITY OF ROCHESTER · PI O'REILLY, MICHAEL A, WOELLER, COLLYNN FREMONT · 2021 to 2022
$424k
HHS | NIH | National Heart, Lung, and Blood Institute (NHLBI) HL133761HHS | NIH | National Heart, Lung, and Blood Institute (NHLBI) HL144776HHS | NIH | National Heart, Lung, and Blood Institute (NHLBI) HL144867HHS | NIH | National Heart, Lung, and Blood Institute (NHLBI) HL168812HHS | NIH | National Heart, Lung, and Blood Institute (NHLBI) HL169961HHS | NIH | National Institute of Environmental Health Sciences (DEHS) ES001247HHS | NIH | National Institute on Aging (NIA) AG070585NCATS NIH HHS KL2 TR001999NHLBI NIH HHS R01 HL133761NHLBI NIH HHS R01 HL144776NHLBI NIH HHS R01 HL144867NHLBI NIH HHS R01 HL168812NHLBI NIH HHS R01 HL169961NIA NIH HHS R21 AG070585NIEHS NIH HHS P30 ES001247
6 · The paper itself

Abstract

Preterm infants exposed to supplemental oxygen (hyperoxia) are at risk for developing heart failure later in life. Exposing rodents in early postnatal life to hyperoxia causes heart failure that resembles cardiac disease seen in adult humans who were born preterm. Neonatal hyperoxia exposure affects the left atrium and left ventricle differently, inhibiting the proliferation and survival of atrial cardiomyocytes while enhancing cardiomyocyte differentiation in the ventricle. In this study, whole genome transcriptomics revealed the left atria of neonatal mice are more responsive to hyperoxia than the left ventricle, with the expression of 4,285 genes affected in the atrium and 1,743 in the ventricle. Although hyperoxia activated p53 target genes in both chambers, it caused greater DNA damage, phosphorylation of the DNA damage responsive ataxia-telangiectasia mutated (ATM) kinase, mitochondrial stress, and apoptosis in the atrium. In contrast, hyperoxia induced the expression of genes involved in DNA repair and stress granules in the ventricle. Atrial cells also showed a greater loss of extracellular matrix and superoxide dismutase 3 (SOD3) expression, possibly contributing to the enlargement of the left atrium and reduced velocity of blood flow across the mitral valve seen in mice exposed to hyperoxia. Diastolic dysfunction and heart failure in hyperoxia-exposed mice may thus stem from its effects on the left atrium, suggesting chamber-specific therapies may be needed to address diastolic dysfunction and heart failure in people who were born preterm.

Indexed as

Atrial Function, LeftHeart AtriaHeart FailureHeart VentriclesHyperoxiaTranscriptomeVentricular Function, LeftAnimalsAnimals, NewbornApoptosisDisease Models, AnimalDNA DamageGene Expression ProfilingMaleMiceMice, Inbred C57BLTumor Suppressor Protein p53DNA damageextracellular matrixheart failurehyperoxiapreterm

Identifiers

PMID40047849
PMCPMC12232461

What Socratic holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.