Evidence map›Paper›PMID 40060038›Full record

ArticleResearch square2025

A Four-Gene Signature from Blood to Exclude Bacterial Etiology of Lower Respiratory Tract Infection in Adults.

Ann Falsey, Derick Peterson, Edward Walsh, Andrea Baran, Chin-Yi Chu, Angela Branche, Daniel Croft, Micheal Peasley, Anthony Corbett, John Ashton and 1 more

Abstract readPreprint
In one paragraph

Article in Research square, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

11 authors.

Ann FalseyUniversity of Rochester.
Derick PetersonUniversity of Rochester School of Medicine.ORCID 0000-0001-8603-660X
Edward WalshUniversity of Rochester.
Andrea BaranUniversity of Rochester.
Chin-Yi ChuUniversity of Rochester.ORCID 0000-0002-2390-3937
Angela BrancheUniversity of Rochester.ORCID 0000-0002-7742-5352
Daniel CroftUniveristy of Rochester.edu.ORCID 0000-0002-1990-5542
Micheal PeasleyUniversity of Rochester.
Anthony CorbettUniversity of Rochester.
John AshtonUniversity of Rochester.ORCID 0000-0001-9875-5994
Thomas MarianiUniversity of Rochester.

Funding

Transcriptional Profiling to Discriminate Bacterial and Non-bacterial Respiratory IllnessesR01AI137364 · NIAID · UNIVERSITY OF ROCHESTER · PI FALSEY, ANN R, MARIANI, THOMAS J · 2019 to 2023
$3.8M
NIAID NIH HHS R01 AI137364
6 · The paper itself

Abstract

Unnecessary antibiotic use is a major driver of antimicrobial resistance, an urgent public health threat. There is an unmet need for improved diagnostics for identifying bacterial etiology in acute respiratory infection (ARI). Hospitalized adults with ARI underwent comprehensive microbiologic testing and those with definitive viral (n = 280), bacterial (n = 129), or mixed viral-bacterial infection (n = 95) had whole blood RNA sequencing. A hard-thresholded, mostly relaxed, LASSO-constrained logistic regression model was used to select a parsimonious gene set (

Identifiers

PMID40060038
PMCPMC11888539

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.