Evidence map›Paper›PMID 40061820›Full record

ArticlePhenomics (Cham, Switzerland)2024

A Protocol for Body MRI/CT and Extraction of Imaging-Derived Phenotypes (IDPs) from the China Phenobank Project.

Chengyan Wang, Shuo Wang, Sha Hua, Ruokun Li, Yan Li, Zhang Shi, Kai Feng, Lizhen Lan, Meng Liu, Xutong Kuang and 16 more

Abstract read
In one paragraph

Article in Phenomics (Cham, Switzerland), 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

26 authors.

Chengyan WangHuman Phenome Institute, Fudan University, Shanghai, 201203 China.ORCID 0000-0002-8890-4973
Shuo WangDigital Medical Research Center, School of Basic Medical Sciences, Fudan University, Shanghai, 200032 China.ORCID 0000-0002-2947-8783
Sha HuaDepartment of Cardiovascular Medicine, Ruijin Hospital Lu Wan Branch, Shanghai Jiao Tong University School of Medicine, Shanghai, 200020 China.ORCID 0000-0002-7036-1237
Ruokun LiDepartment of Radiology, Ruijin Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai, 200025 China.ORCID 0000-0003-0072-3105
Yan LiDepartment of Radiology, Ruijin Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai, 200025 China.ORCID 0000-0003-1569-874X
Zhang ShiDepartment of Radiology, Zhongshan Hospital, Fudan University, Shanghai, 200032 China.ORCID 0000-0001-7739-7497
Kai FengHuman Phenome Institute, Fudan University, Shanghai, 201203 China.ORCID 0000-0002-1468-1834
Lizhen LanHuman Phenome Institute, Fudan University, Shanghai, 201203 China.ORCID 0000-0001-6422-6963
Meng LiuHuman Phenome Institute, Fudan University, Shanghai, 201203 China.ORCID 0000-0001-5841-5872
Xutong KuangHuman Phenome Institute, Fudan University, Shanghai, 201203 China.ORCID 0000-0002-4918-0271
Xueqin XiaHuman Phenome Institute, Fudan University, Shanghai, 201203 China.ORCID 0000-0002-2971-9639
Shihai ZhaoDepartment of Radiology, Zhongshan Hospital, Fudan University, Shanghai, 200032 China.ORCID 0000-0003-2185-8041
Xiaodan YeDepartment of Radiology, Zhongshan Hospital, Fudan University, Shanghai, 200032 China.ORCID 0000-0003-3059-2740
Jianhua JinHuman Phenome Institute, Fudan University, Shanghai, 201203 China.ORCID 0000-0001-9617-8257
Jing LiDepartment of Radiology, Changhai Hospital of Shanghai, Naval Medical University, Shanghai, 200433 China.ORCID 0000-0003-2921-3563
Bin YangMedical Imaging Center, Calmette Hospital &, The First Hospital of Kunming, Kunming, 650051 China.ORCID 0000-0001-5518-7325
Ming-Hua ZhengDepartment of Hepatology, NAFLD Research Center, The First Affiliated Hospital of Wenzhou Medical University, Wenzhou, 325015 China.ORCID 0000-0003-4984-2631
Weibo ChenPhilips Healthcare. Co., Shanghai, 200070 China.ORCID 0000-0002-4727-3642
Ying-Hua ChuMR Collaboration, Siemens Healthineers Ltd., Shanghai, 201318 China.ORCID 0000-0002-5574-4053
Juan HuMedical Imaging Department, First Affiliated Hospital of Kunming Medical University, Kunming, 650032 China.ORCID 0000-0003-4201-1341
Xiahai ZhuangSchool of Data Science, Fudan University, Shanghai, 200433 China.ORCID 0000-0003-4351-4979
Xiaolong QiDepartment of Radiology, Center of Portal Hypertension, Zhongda Hospital, Medical School, Southeast University, Nanjing, 210044 China.ORCID 0000-0002-3559-5855
Wenjia BaiDepartment of Brain Sciences, Imperial College London, London, SW72AZ UK.ORCID 0000-0003-2943-7698
He WangHuman Phenome Institute, Fudan University, Shanghai, 201203 China.ORCID 0000-0002-2053-9439
Jingchun LuoHuman Phenome Institute, Fudan University, Shanghai, 201203 China.ORCID 0000-0001-5138-6458
Mei TianHuman Phenome Institute, Fudan University, Shanghai, 201203 China.ORCID 0000-0002-1587-2114

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Currently, standard protocols for body imaging and corresponding image processing pipelines in population-based cohort studies are unavailable, limiting the applications of body imaging. Based on the China Phenobank Project (CHPP), the present study described a body imaging protocol for multiple organs, including cardiac structures, liver, spleen, pancreas, kidneys, lung, prostate, and uterus, and the corresponding image processing pipelines promoted its development. Briefly, the body imaging protocol comprised a 40-min cardiac magnetic resonance imaging (MRI) scan, a 5-min computed tomography (CT) scan, a 20-min abdominal MRI scan, and a 10-min pelvic MRI scan. The recommended image processing pipeline utilized deep learning segmentation models to facilitate the analysis of large amount of data. This study aimed to provide a reference for planning studies based on the CHPP platform.

Indexed as

Body imagingComputed tomographyImaging derived phenotypeMagnetic resonance imagingStandard protocol

Identifiers

PMID40061820
PMCPMC11889319

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.