Evidence mapPaperPMID 40075313Full record

ArticleBMC cancer2025

Role of arachidonic acid metabolism in osteosarcoma prognosis by integrating WGCNA and bioinformatics analysis.

Yaling Wang, Peichun Hsu, Haiyan Hu, Feng Lin, Xiaokang Wei

Abstract read
In one paragraph

Article in BMC cancer, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Review
  3. Pannexin channels in inflammation and tumorigenesis.Frontiers in cell and developmental biology · 2025
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4 · The record

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PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Yaling WangDepartment of Oncology, Shanghai Eighth People's Hospital, Shanghai, China.
Peichun HsuDepartment of Orthopedics, Shanghai Sixth People's Hospital Affiliated to Shanghai Jiao Tong University School of Medicine, Shanghai, China.
Haiyan HuShanghai Clinical Research Ward (SCRW), Shanghai Sixth People's Hospital Affiliated to Shanghai Jiao Tong University School of Medicine, Shanghai, China.
Feng LinDepartment of Oncology, Shanghai Eighth People's Hospital, Shanghai, China. larry_lin57@hotmail.com.
Xiaokang WeiDepartment of Orthopedics, Shanghai Sixth People's Hospital Affiliated to Shanghai Jiao Tong University School of Medicine, Shanghai, China. profweish@hotmail.com.

Funding

National Natural Science Foundation of China No.82072967the Shanghai Jiao Tong University "Star Project" medical and industrial cross research fund of China YG2021QN101
6 · The paper itself

Abstract

backgroundOsteosarcoma is a rare tumor with poor clinical outcomes. New therapeutic targets are urgently needed. Previous research indicates that genes abnormally expressed in osteosarcoma are significantly involved in the arachidonic acid (AA) metabolic pathway. However, the role of arachidonic acid metabolism-related genes (AAMRGs) in osteosarcoma prognosis remains unknown.

methodsOsteosarcoma samples from The Cancer Genome Atlas (TCGA) and Gene Expression Omnibus (GEO) databases were classified into high-score and low-score groups based on AAMRGs scores obtained through ssGSEA analysis. The intersecting genes were identified from weighted gene co-expression network analysis (WGCNA), DEGs (osteosarcoma vs. normal) and DE-AAMRGs (high- vs. low-score). An AA metabolism predictive model of the five AAMRGs were established by Cox regression and the LASSO algorithm. Model performance was evaluated using Kaplan-Meier survival and receiver operating characteristic (ROC) curve analysis. In vitro experiments of the AA related biomarkers was validated.

resultsOur study constructed an AAMRGs prognostic signature (CD36, CLDN11, STOM, EPYC, PANX3). K-M analysis indicated that patients in the low-risk group showed superior overall survival to high-risk group (p<0.05). ROC curves showed that all AUC values in the prognostic model exceeded 0.76. By ESTIMATE algorithms, we discovered that patients in high-risk groups had lower immune score, stromal score, and estimate score. Correlation analysis showed the strongest positive correlation between STOM and natural killer cells, and the highest negative association between PANX3 and central memory CD8 T cells. An AAMRGs prognostic signature was constructed for osteosarcoma prognosis.

conclusionThe study suggested that a high level of AAMRGs might serve as a biomarker for poor prognosis in osteosarcoma and offers a potential explanation for the role of cyclooxygenase inhibitors in cancer. The five biomarkers (CD36, CLDN11, EPYC, PANX3, and STOM) were screened to construct an AAMRGs risk model with prognostic value, providing a new reference for the prognosis and treatment of osteosarcoma.

Indexed as

Arachidonic AcidBiomarkers, TumorBone NeoplasmsComputational BiologyOsteosarcomaFemaleGene Expression ProfilingGene Expression Regulation, NeoplasticGene Regulatory NetworksHumansKaplan-Meier EstimateMalePrognosisROC CurveArachidonic AcidBiomarkers, TumorArachidonic acidBioinformaticsBiomarkerImmunotherapy responseOsteosarcomaPrognosisWGCNA

Identifiers

PMID40075313
PMCPMC11905593

What Socratic holds

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.