Evidence map›Paper›PMID 40085050›Full record

Trial reportClinical cancer research : an official journal of the American Association for Cancer Research2025

Protein Profiles Predict Treatment Responses to the PI3K Inhibitor Umbralisib in Patients with Chronic Lymphocytic Leukemia.

Yanping Yin, Haifeng Xu, Liye He, Jennifer R Brown, Anthony R Mato, Tero Aittokallio, Sigrid S Skånland

2 registry-linked trialsAbstract readClinical Trial, Phase IIMulticenter Study
In one paragraph

Trial report in Clinical cancer research : an official journal of the American Association for Cancer Research, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to 2 registered trials, which are not on this map. Cited by 6 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT02742090 phase2terminatednot on this map

A Phase 2 Study to Assess the Safety and Efficacy of TGR-1202 (Umbralisib) in Patients With Chronic Lymphocytic Leukemia (CLL) Who Are Intolerant to Prior BTK or PI3K-Delta Inhibitor Therapy

TypeinterventionalSponsorTG Therapeutics, Inc.Ran2016 to 2021Enrolled51ConditionsChronic Lymphocytic LeukemiaArmsUmbralisib
NCT04624633 phase2active not recruitingnot on this map

A Phase 2 Study of Acalabrutinib, Umbralisib, and Ublituximab (AU2) in Relapsed and Previously Untreated CLL Patients

TypeinterventionalSponsorJennifer R. Brown, MD, PhDRan2020 to 2028Enrolled29ConditionsChronic Lymphocytic Leukemia, Small Lymphocytic Lymphoma, Relapsed Chronic Lymphocytic Leukemia, Refractory Chronic Lymphocytic LeukemiaArmsAcalabrutinib, Umbralisib, Ublituximab
3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Article
  4. A renaissance in targeting the PI3K/AKT/mTOR pathway.Nature reviews. Drug discovery · 2026
    Review
  5. Article
  6. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Yanping Yin *Department of Cancer Immunology, Institute for Cancer Research, Oslo University Hospital, Oslo, Norway.ORCID 0000-0003-0481-5955
Haifeng Xu *Department of Cancer Genetics, Institute for Cancer Research, Oslo University Hospital, Oslo, Norway.ORCID 0000-0003-0165-6709
Liye HeInstitute for Molecular Medicine Finland (FIMM), HiLIFE, University of Helsinki, Helsinki, Finland.ORCID 0000-0002-6632-2112
Jennifer R BrownDepartment of Medical Oncology, Dana-Farber Cancer Institute, Harvard Medical School, Boston, Massachusetts.ORCID 0000-0003-2040-4961
Anthony R MatoMemorial Sloan Kettering Cancer Center, New York, New York.ORCID 0000-0001-8724-1875
Tero AittokallioDepartment of Cancer Genetics, Institute for Cancer Research, Oslo University Hospital, Oslo, Norway.ORCID 0000-0002-0886-9769
Sigrid S SkånlandDepartment of Cancer Immunology, Institute for Cancer Research, Oslo University Hospital, Oslo, Norway.ORCID 0000-0003-1630-356X

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI SELWYN M VICKERS · 1985 to 2026
$347.4M
ProteomicsP01CA206978 · NCI · DANA-FARBER CANCER INST · PI WU, CATHERINE JU-YING · 2016 to 2025
$17.0M
Genetic Predisposition to Chronic Lymphocytic Leukemia (CLL)R01CA258924 · NCI · DANA-FARBER CANCER INST · PI BROWN, JENNIFER R · 2021 to 2025
$3.1M
Unlocking the Potential of PI3K Inhibition in CLLR01CA213442 · NCI · DANA-FARBER CANCER INST · PI BROWN, JENNIFER R · 2017 to 2021
$2.9M
FondsstiftelsenNational Cancer Institute (NCI) R01CA213442National Cancer Institute (NCI) R01CA258924NCI NIH HHS P01 CA206978NCI NIH HHS P30 CA008748NCI NIH HHS R01 CA213442NCI NIH HHS R01 CA258924Radium Hospital FoundationResearch Council of Norway and the Norwegian Cancer Society joint grant 328827South-Eastern Norway Regional Health Authority 2020026South-Eastern Norway Regional Health Authority 2023105Stiftelsen Kristian Gerhard Jebsen (KGJF) Grant 19the Finnish Cancer FoundationThe Norwegian Cancer Society 216104The Norwegian Cancer Society 273810the Research Council of Finland 340141the Research Council of Finland 345803the Research Council of Finland under the frame of ERA PerMed 344698the Research Council of Norway under the frame of Digital Life Norway 294916the Research Council of Norway under the frame of ERA PerMed 322898
6 · The paper itself

Abstract

purposeThe management of chronic lymphocytic leukemia (CLL) has significantly improved with targeted therapies. However, many patients experience a suboptimal response. To optimally select the best therapy, predictive biomarkers are necessary. In this study, we used the phosphoinositide 3-kinase (PI3K) inhibitor umbralisib as a model to (i) understand the impact of targeted treatment on cell signaling and immunophenotypes in responders and nonresponders, (ii) identify molecular features that predict individual treatment responses, and (iii) suggest alternative treatment options for the nonresponders. EXPERIMENTAL

designWe performed functional phenotyping of CLL cells from patients enrolled in two clinical trials with umbralisib, administered either as a monotherapy (NCT02742090, n = 55) or in combination with the Bruton tyrosine kinase (BTK) inhibitor acalabrutinib (NCT04624633, n = 12).

resultsWe found that umbralisib monotherapy led to significant changes in (phospho)protein levels, including AKT (pS473), in responders but not in nonresponders. Furthermore, the proportion of cytotoxic natural killer (NK) cells increased at the end of the study but only in responders, suggesting a role in the antitumor response. To identify molecular predictors of response, we used the baseline levels of 30 (phospho)proteins in the monotherapy cohort as input features for a machine learning model, which achieved significant prediction accuracy in cross-validation and maintained its predictive power in the combination cohort. Drug sensitivity profiling of the CLL cells at baseline suggested that PI3K + Bcl-2 inhibitors are effective in umbralisib nonresponders.

conclusionsFunctional phenotyping reveals differential cellular responses to umbralisib treatment in responders and nonresponders; predicts treatment response of individual patients with CLL; and suggests alternative treatment options for the nonresponders.

Indexed as

Biomarkers, TumorLeukemia, Lymphocytic, Chronic, B-CellPhosphoinositide-3 Kinase InhibitorsAgammaglobulinaemia Tyrosine KinaseAgedAged, 80 and overAntineoplastic Combined Chemotherapy ProtocolsBenzamidesFemaleHumansMaleMiddle AgedPhosphatidylinositol 3-KinasesProtein Kinase InhibitorsPyrazinesTreatment OutcomeacalabrutinibAgammaglobulinaemia Tyrosine KinaseBenzamidesBiomarkers, TumorBTK protein, humanPhosphatidylinositol 3-KinasesPhosphoinositide-3 Kinase InhibitorsProtein Kinase InhibitorsPyrazines

Identifiers

PMID40085050
PMCPMC12081185

What Socratic holds

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Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.