ArticleBMC plant biology2025
Integrative analysis of transcriptome and metabolome reveal molecular mechanism of tolerance to salt stress in rice.
Article in BMC plant biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.
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Who cites it
12 citing papers in PubMed.
- Integrated Multi-Omics Analysis Reveals the Involvement of Alanine, Aspartate and Glutamate Metabolism in Wheat Responses to Salt Stress.Plants (Basel, Switzerland) · 2026Article
- Cytological and Gene Expression Analysis Reveal Salt Resistance in Common Wild Rice (Plants (Basel, Switzerland) · 2026Article
- Integrated Multi-Omics Characterization of the Salt-Sensitive MutantPlants (Basel, Switzerland) · 2026Article
- Differential response to waterlogging stress in rapeseed (Brassica napus L.): insights from physiological, transcriptomic, and metabolomic analyses.BMC plant biology · 2026Article
- Multi-Omics Analysis Reveals the Adaptive Responses ofBiology · 2026Article
- Bridging scales: integrated multi-omics and deep phenotyping for climate resilience in crop plants.Frontiers in plant science · 2026Review
- Beyond desalinization: root interactions with halophyteFrontiers in plant science · 2026Article
- Integrated physiological, transcriptomic and metabolomic analysis reveals differential cold response in wheat seedlings across varieties.Frontiers in plant science · 2026Article
- Morphological, physiological, and transcriptomic analysis ofFrontiers in plant science · 2026Article
- Multiomics Profiling Unveils Key Genes and Metabolites Involved in the Salt Tolerance ofGenes · 2025Article
- A multi-layered regulatory model uncovers the central role of OsPRR37 in coordinating multiple agronomic traits.BMC plant biology · 2025Article
- Integrated Transcriptomic and Metabolomic Analyses Reveal Key Responses of Cotton to Salt Stress Post-Germination.Current issues in molecular biology · 2025Article
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Authors and funding
11 authors.
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Abstract
backgroundSalt stress is considered to be one of the major abiotic stresses influencing rice growth and productivity. To improve rice crop productivity in saline soils, it is essential to choose a suitable variety for mitigating salt stress and gain a deep understanding of the underlying mechanisms. The current study explored the salt tolerance mechanism of wild rice 'HD96-1 (salt resistive)' and conventional rice 'IR29 (salt sensitive)' by evaluating morph-physiological, transcriptomic, and metabolomic approaches.
resultsPhysiological data indicated that HD96-1 had higher chlorophyll content, higher photosynthetic efficiency, more stable Na
conclusionUnder salt stress, HD96-1 maintained ionic balance and photosynthetic efficiency by up-regulating the expression of NHX4 gene and reducing the overaccumulation of glucose metabolites, respectively, and mitigated osmotic stress and oxidative stress by down-regulating the expression of ACX4 and promoting the accumulation of isoleucine, respectively, thereby enhancing the adaptability to salt stress. IR29 maintained photosynthetic efficiency under salt stress by down-regulating the expression of light-harvesting chromophore protein complex (LHCH II)-related genes, thereby enhancing adaptation to salt stress.
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