Evidence map›Paper›PMID 40092111›Full record

ArticleAmerican journal of translational research2025

Comprehensive pan-cancer analysis of LAMA3: implications for prognosis and immunotherapy.

Hui Huang, Wei Dong, Xuan Qin, Ali Usama, Anees Cheema, Chunlei Deng, Sara Sarfaraz, Qingyun Pan, Majid Alhomrani, Abdulhakeem S Alamri and 4 more

Abstract read
In one paragraph

Article in American journal of translational research, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Hui HuangDepartment of Oncology, The Fifth Hospital of Wuhan Wuhan 430050, Hubei, China.
Wei DongDepartment of Radiology, The Fifth Hospital of Wuhan Wuhan 430050, Hubei, China.
Xuan QinDepartment of Radiology, The Fifth Hospital of Wuhan Wuhan 430050, Hubei, China.
Ali UsamaDepartment of Internal Medicine, Wyckoff Heights Medical Center Brooklyn, NY 11237, USA.
Anees CheemaDepartment of Internal Medicine, Wyckoff Heights Medical Center Brooklyn, NY 11237, USA.
Chunlei DengDepartment of Reproductive Medicine, Taihe Hospital Affiliated to Hubei University of Medicine Shiyan 442000, Hubei, China.
Sara SarfarazDepartment of Bioinformatics, Faculty of Biomedical and Life Sciences, Kohsar University Murree 47150, Pakistan.
Qingyun PanDepartment of Endocrinology, The Fifth Hospital of Wuhan Wuhan 430050, Hubei, China.
Majid AlhomraniDepartment of Clinical Laboratories Sciences, The Faculty of Applied Medical Sciences, Taif University Taif 21944, Saudi Arabia.
Abdulhakeem S AlamriDepartment of Clinical Laboratories Sciences, The Faculty of Applied Medical Sciences, Taif University Taif 21944, Saudi Arabia.
Naif ALSuhaymiDepartment of Emergency Medical Services, Faculty of Health Sciences - AlQunfudah, Umm Al-Qura University Makkah 21912, Saudi Arabia.
Saleh A AlghamdiDepartment of Clinical Laboratory Since, Medical Genetics, College of Applied Medical Sciences, Taif University Taif 21944, Saudi Arabia.
Ahmad A AlghamdiDepartment of Clinical Laboratory Since, Medical Genetics, College of Applied Medical Sciences, Taif University Taif 21944, Saudi Arabia.
Su ZhengDepartment of Rehabilitation, Taihe Hospital (Affiliated Hospital of Hubei University of Medical) Shiyan 442000, Hubei, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

objectivesLaminin subunit alpha 3 (LAMA3) has been implicated in various cellular processes relevant to cancer progression, including cell proliferation, migration, and adhesion. In this study, we explored the expression, prognostic significance, and functional role of LAMA3 across multiple cancer types. METHODOLOGY: The in silico analyses involve using various bioinformatics tools and databases, such as The Cancer Genome Atlas (TCGA), TIMER2.0, GEPIA2, UALCAN, Kaplan-Meier (KM) plotter, GENT2, Human Protein Atlas (HPA), OncoDB, Gene Set Cancer Analysis (GSCA), and TISIDB. The in vitro analyses include cell culture, gene knockdown, and assays for cell proliferation, colony formation, and wound healing.

resultsPan-cancer analysis revealed significant variations in LAMA3 expression, with upregulation observed in cancers such as pancreatic adenocarcinoma (PAAD) and stomach adenocarcinoma (STAD), and downregulation in breast cancer (BRCA) and colon adenocarcinoma (COAD). Prognostic analyses indicated high LAMA3 expression correlated with poor overall survival (OS) in PAAD and STAD, whereas low expression was associated with adverse outcomes in BRCA. Validation analysis confirmed differential expression and localized LAMA3 primarily to the endoplasmic reticulum. Analysis of clinical features in BRCA, PAAD, and STAD showed consistent expression trends across different stages, races, and age groups. Additionally, mutational and copy number variations (CNVs) analyses revealed prevalent heterozygous amplifications and deletions in LAMA3 across BRCA, PAAD, and STAD. Promoter methylation was inversely correlated with LAMA3 expression in BRCA, PAAD, and STAD, although survival outcomes were unaffected. Protein-protein interaction (PPI) and gene enrichment analyses indicated LAMA3's involvement in ECM-receptor interactions and PI3K-Akt signaling, pathways critical in cancer. Finally, functional assays following LAMA3 knockdown in HT-29 cells demonstrated reduced cell proliferation, colony formation, and wound healing, implicating LAMA3 in tumor growth and metastasis.

conclusionOverall, these findings suggest that LAMA3 plays a multifaceted role in tumorigenesis and holds potential as a prognostic biomarker and therapeutic target in multiple cancers.

Indexed as

CancerdiagnosisLAMA3pan-cancer analysistreatment

Identifiers

PMID40092111
PMCPMC11909552

What Socratic holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.