Evidence map›Paper›PMID 40135786›Full record

ArticleAdvanced science (Weinheim, Baden-Wurttemberg, Germany)2025

Chromosome-Level Genome Assembly of the Leafcutter Bee Megachile rotundata Reveals Its Ecological Adaptation and Pollination Biology.

Rangjun Shi, Pan Duan, Mengmeng Zhu, Rong Zhang, Zihua Zhao, Xin Nie, Hanhou He, Li Hou, Xianhui Wang

Abstract read
In one paragraph

Article in Advanced science (Weinheim, Baden-Wurttemberg, Germany), 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Rangjun ShiState Key Laboratory of Integrated Management of Pest Insects and Rodents, Institute of Zoology, Chinese Academy of Sciences, Beijing, 100080, China.ORCID https://orcid.org/0000-0002-8230-8388
Pan DuanState Key Laboratory of Integrated Management of Pest Insects and Rodents, Institute of Zoology, Chinese Academy of Sciences, Beijing, 100080, China.
Mengmeng ZhuInstitute of Plant Protection, Ningxia Academy of Agricultural and Forestry Sciences, Yinchuan, 750002, China.
Rong ZhangInstitute of Plant Protection, Ningxia Academy of Agricultural and Forestry Sciences, Yinchuan, 750002, China.
Zihua ZhaoDepartment of Plant Biosecurity & MARA Key Laboratory of Surveillance and Management for Plant Quarantine Pests, College of Plant Protection, China Agricultural University, Beijing, 100193, China.
Xin NieState Key Laboratory of Integrated Management of Pest Insects and Rodents, Institute of Zoology, Chinese Academy of Sciences, Beijing, 100080, China.
Hanhou HeState Key Laboratory of Integrated Management of Pest Insects and Rodents, Institute of Zoology, Chinese Academy of Sciences, Beijing, 100080, China.
Li HouState Key Laboratory of Integrated Management of Pest Insects and Rodents, Institute of Zoology, Chinese Academy of Sciences, Beijing, 100080, China.ORCID https://orcid.org/0000-0001-6727-7053
Xianhui WangState Key Laboratory of Integrated Management of Pest Insects and Rodents, Institute of Zoology, Chinese Academy of Sciences, Beijing, 100080, China.ORCID https://orcid.org/0000-0002-8732-829X

Funding

Chinese Academy of Sciences IPM1802Chinese Academy of Sciences IPM2014Regional Key R&D Program of Ningxia Hui Autonomous Region 2022BBF02028State Key Laboratory of Integrated Management of Pest Insects and Rodents, Institute of ZoologyStrategic Priority Research Program of the Chinese Academy of Sciences XDA26030302Youth Innovation Promotion Association CAS 2021079
6 · The paper itself

Abstract

The leafcutter bee Megachile rotundata is the world's most intensively managed solitary bee, owing to its easy manipulation and high pollination efficacy. Here, a high-quality chromosome-level M. rotundata genome, covering 280.68 Mb is presented. A total of 10 701 genes are predicted, of which 93.06% are functionally annotated. Based on the new genome assembly, transposable elements, noncoding RNAs, as well as gene families associated with pollination biology and ecological adaptation are systematically characterized. Comparative genomic analysis shows a notable expansion of Toll gene family but the contraction of detoxification gene in M. rotundata genome. Surprisingly, these expanded Toll-1 genes and their downstream genes display abundant mRNA levels in diapausing prepupae. Additionally, diapausing prepupae show significantly upregulated expression of antimicrobial peptide genes and a higher survival rate after Escherichia coli exposure compared to nondiapausing prepupae, indicating an enhanced immune response during M. rotundata diapause. The M. rotundata genome provides an important foundation for understanding its ecological adaptation and optimizing its exceptional pollination efficiency in the future.

Indexed as

Adaptation, PhysiologicalChromosomesGenome, InsectPollinationAnimalsBeesdiapauseevolutiongenomeinsecttoll receptors

Identifiers

PMID40135786
PMCPMC12199319

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.