Evidence map›Paper›PMID 40137719›Full record

ArticlePathogens (Basel, Switzerland)2025

High-Throughput Sequencing Enables Rapid Analyses of Nematode Mitochondrial Genomes from an Environmental Sample.

Akshita Jain, Tongda Li, John Wainer, Jacqueline Edwards, Brendan C Rodoni, Timothy I Sawbridge

Abstract read
In one paragraph

Article in Pathogens (Basel, Switzerland), 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. First report of the complete mitochondrial genome of anInternational journal for parasitology. Parasites and wildlife · 2026
    Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Akshita JainSchool of Applied Systems Biology, La Trobe University, Bundoora, VIC 3083, Australia.ORCID 0000-0001-8755-2569
Tongda LiAgriBio, Centre for AgriBioscience, Agriculture Victoria Research, Department of Energy, Environment and Climate Action (DEECA), Bundoora, VIC 3083, Australia.ORCID 0000-0001-9430-2779
John WainerAgriBio, Centre for AgriBioscience, Agriculture Victoria Research, Department of Energy, Environment and Climate Action (DEECA), Bundoora, VIC 3083, Australia.ORCID 0000-0002-1295-3437
Jacqueline EdwardsSchool of Applied Systems Biology, La Trobe University, Bundoora, VIC 3083, Australia.
Brendan C RodoniSchool of Applied Systems Biology, La Trobe University, Bundoora, VIC 3083, Australia.
Timothy I SawbridgeSchool of Applied Systems Biology, La Trobe University, Bundoora, VIC 3083, Australia.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Mitochondrial genomes serve as essential tools in evolutionary biology, phylogenetics, and population genetics due to their maternal inheritance, lack of recombination, and conserved structure. Traditional morphological methods for identifying nematodes are often insufficient for distinguishing cryptic species complexes. This study highlights recent advancements in nematode mitochondrial genome research, particularly the impact of long-read sequencing technologies such as Oxford Nanopore. These technologies have facilitated the assembly of mitochondrial genomes from mixed soil samples, overcoming challenges associated with designing specific primers for long PCR amplification across different groups of parasitic nematodes. In this study, we successfully recovered and assembled eleven nematode mitochondrial genomes using long-read sequencing, including those of two plant-parasitic nematode species. Notably, we detected

Indexed as

Genome, MitochondrialHigh-Throughput Nucleotide SequencingNematodaAnimalsAustraliaPhylogenySoilSoilAustralian biosecurityHeteroderahigh-throughput sequencingmitochondrial genomesrange extension

Identifiers

PMID40137719
PMCPMC11944570

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.