Evidence map›Paper›PMID 40143338›Full record

ArticleViruses2025

Evaluation of Saliva Collection and DNA Extraction Methods for Practical Application of Salivary Human Herpesvirus 6 and 7 Assays.

Shinsuke Tamai, Ryota Sone, Koichi Watanabe, Kazuhiro Shimizu

Abstract readEvaluation Study
In one paragraph

Article in Viruses, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Trial
  2. Observational
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Shinsuke TamaiDepartment of Sports Sciences, Japan Institute of Sports Sciences, Kita-ku 115-0056, Tokyo, Japan.ORCID 0000-0001-7379-0304
Ryota SoneFaculty of International Agriculture and Food Studies, Tokyo University of Agriculture, Setagaya-ku 156-8502, Tokyo, Japan.ORCID 0000-0003-4488-4875
Koichi WatanabeInstitute of Health and Sport Sciences, University of Tsukuba, Tsukuba 305-8574, Ibaraki, Japan.ORCID 0000-0001-5439-9983
Kazuhiro ShimizuDepartment of Sports Sciences, Japan Institute of Sports Sciences, Kita-ku 115-0056, Tokyo, Japan.

Funding

Japan Society for the Promotion of Science JP22K21226, JP22K21226
6 · The paper itself

Abstract

Salivary human herpesvirus 6 and/or 7 (HHV-6/7) have recently attracted attention as microbiological markers of physiological fatigue in laborers and athletes. However, the accuracy and efficiency of the HHV-6/7 assays can be improved for practical application. We conducted three experiments to identify suitable saliva collection and DNA extraction methods for practical salivary HHV-6/7 assays. The main experiment compared the data, including template DNA or HHV-6/7 concentrations, among three saliva collection methods (cotton, synthetic, and no swabs) and two DNA extraction methods (magnetic bead-based and silica column-based). It showed that using swabs had adverse effects: lower template DNA concentration, lower HHV-6/7 detection rates, higher coefficient of variation values, and lower concentrations. Moreover, magnetic bead-based methods resulted in higher HHV-6/7 detection rates and lower coefficient of variation values. Sub-experiment 1 examined practical saliva collection methods and demonstrated that the stimulated spitting method could collect saliva in a shorter time with lower subjective stress than the unstimulated spitting and stimulated swabbing methods. Sub-experiment 2 investigated diurnal variation in salivary HHV-6/7 levels but did not show diurnal variation. These findings suggest that (1) the combination of stimulated spitting saliva collection and magnetic bead-based DNA extraction is most suitable for practical salivary HHV-6/7 assays, and (2) saliva collection can be conducted whenever needed.

Indexed as

DNA, ViralHerpesvirus 6, HumanHerpesvirus 7, HumanRoseolovirus InfectionsSalivaSpecimen HandlingAdultFemaleHumansMaleDNA, Viralhuman herpesvirus 6 and 7nucleic acid extractionPCRpractical applicationsaliva collectionviral testing

Identifiers

PMID40143338
PMCPMC11945696

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.