Evidence map›Paper›PMID 40153704›Full record

ArticlePLoS genetics2025

Quantitative analysis of relationship between mutation rate and speed of adaptation under antibiotic exposure in Escherichia coli.

Atsushi Shibai, Minako Izutsu, Hazuki Kotani, Chikara Furusawa

Abstract read
In one paragraph

Article in PLoS genetics, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Atsushi ShibaiCenter for Biosystems Dynamics Research, RIKEN, Osaka, Japan.ORCID https://orcid.org/0000-0002-4675-1884
Minako IzutsuCenter for Biosystems Dynamics Research, RIKEN, Osaka, Japan.ORCID https://orcid.org/0000-0002-3291-3256
Hazuki KotaniCenter for Biosystems Dynamics Research, RIKEN, Osaka, Japan.
Chikara FurusawaCenter for Biosystems Dynamics Research, RIKEN, Osaka, Japan.ORCID https://orcid.org/0000-0003-3554-4975

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Mutations are the ultimate source of biological evolution that creates genetic variation in populations. Mutations can create new advantageous traits but can also potentially interfere with pre-existing organismal functions. Therefore, organisms may have evolved mutation rates to appropriate levels to maintain or improve their fitness. In this study, we aimed to experimentally quantify the relationship between the mutation rate and evolution of antibiotic resistance. We conducted an evolution experiment using 12 Escherichia coli mutator strains with increased mutation rates and five antibiotics. Our results demonstrated that the rate of adaptation generally increased with higher mutation rates, except in a single mutator strain with the highest mutation rate, which exhibited a significant decline in evolutionary speed. To further elucidate these findings, we developed a simple population dynamics model that successfully recapitulated the observed dependence of adaptation speed on mutation rate. These findings provide important insights into the evolution of mutation rate accompanied by the evolution.

Indexed as

Adaptation, PhysiologicalAnti-Bacterial AgentsDrug Resistance, BacterialEscherichia coliMutation RateEvolution, MolecularMutationAnti-Bacterial Agents

Identifiers

PMID40153704
PMCPMC11975134

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.