Evidence map›Paper›PMID 40157913›Full record

ArticleNature communications2025

Efficient and accurate framework for genome-wide gene-environment interaction analysis in large-scale biobanks.

Yuzhuo Ma, Yanlong Zhao, Ji-Feng Zhang, Wenjian Bi

Abstract read
In one paragraph

Article in Nature communications, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Yuzhuo MaDepartment of Medical Genetics, School of Basic Medical Sciences, Peking University, Beijing, China.
Yanlong ZhaoState Key Laboratory of Mathematical Sciences, Academy of Mathematics and Systems Science, Chinese Academy of Sciences, Beijing, China.
Ji-Feng ZhangState Key Laboratory of Mathematical Sciences, Academy of Mathematics and Systems Science, Chinese Academy of Sciences, Beijing, China.
Wenjian BiDepartment of Medical Genetics, School of Basic Medical Sciences, Peking University, Beijing, China. wenjianb@pku.edu.cn.ORCID http://orcid.org/0000-0002-5108-9311

Funding

National Natural Science Foundation of China (National Science Foundation of China) 62273010
6 · The paper itself

Abstract

Gene-environment interaction (G×E) analysis elucidates the interplay between genetic and environmental factors. Genome-wide association studies (GWAS) have expanded to encompass complex traits like time-to-event and ordinal traits, which provide richer phenotypic information. However, most existing scalable approaches focus only on quantitative or binary traits. Here we propose SPAGxE

Indexed as

Biological Specimen BanksGene-Environment InteractionGenome-Wide Association StudyComputer SimulationGenotypeHumansModels, GeneticPhenotypePolymorphism, Single NucleotideUnited Kingdom

Identifiers

PMID40157913
PMCPMC11955004

What Socratic holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.