Evidence map›Paper›PMID 40167919›Full record

ArticleMethods in molecular biology (Clifton, N.J.)2025

A Comprehensive Workflow for Cerebrospinal Fluid Proteomics in the Study of Brain Tumors.

Ankit Halder, Suhisna Dutta, Sanjeeva Srivastava

Abstract read
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In one paragraph

Article in Methods in molecular biology (Clifton, N.J.), 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Ankit HalderDepartment of Biosciences and Bioengineering, Indian Institute of Technology Bombay, Mumbai, Maharashtra, India.
Suhisna DuttaDepartment of Biosciences and Bioengineering, Indian Institute of Technology Bombay, Mumbai, Maharashtra, India.
Sanjeeva SrivastavaDepartment of Biosciences and Bioengineering, Indian Institute of Technology Bombay, Mumbai, Maharashtra, India. sanjeeva@iitb.ac.in.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The cerebrospinal fluid (CSF) plays a critical role in maintaining homeostasis within the central nervous system (CNS). Detecting protein alterations in CSF associated with brain tumors offers a unique opportunity to enhance diagnosis, prognosis, recurrence monitoring, and treatment response. As an extracellular component of the CNS, it serves as a valuable reservoir of biomarkers that reflect changes associated with brain tumors-biomarkers that are often difficult to detect in the systemic circulation due to the blood-brain barrier. Advances in liquid biopsy techniques for CSF, coupled with high-throughput technologies, have the potential to significantly benefit patients. Here, we provide a comprehensive overview of methodologies for studying the CSF proteome to identify brain tumor-associated alterations.

Indexed as

Biomarkers, TumorBrain NeoplasmsCerebrospinal Fluid ProteinsProteomeProteomicsHumansLiquid BiopsyWorkflowBiomarkers, TumorCerebrospinal Fluid ProteinsProteomeBiomarkersCerebrospinal Fluid (CSF)Data Dependent Acquisition (DDA)Data Independent Acquisition (DIA)Mass SpectrometryProteomics

Identifiers

What Socratic holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.