Evidence map›Paper›PMID 40169935›Full record

ArticleCancer biology & therapy2025

Identification of endoplasmic reticulum stress-related genes as prognostic markers in colon cancer.

Wenjing Xu, Wei Li, Dayu Kuai, Yaqiang Li, Wei Sun, Xian Liu, Baohong Xu

Abstract read
In one paragraph

Article in Cancer biology & therapy, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Wenjing XuDepartment of Gastroenterology, Beijing Luhe Hospital Affiliated to Capital Medical University, Beijing, China.
Wei LiDepartment of Gastroenterology, Beijing Luhe Hospital Affiliated to Capital Medical University, Beijing, China.
Dayu KuaiDepartment of Gastroenterology, Beijing Luhe Hospital Affiliated to Capital Medical University, Beijing, China.
Yaqiang LiDepartment of Gastroenterology, Beijing Luhe Hospital Affiliated to Capital Medical University, Beijing, China.
Wei SunDepartment of Gastroenterology, Beijing Luhe Hospital Affiliated to Capital Medical University, Beijing, China.
Xian LiuDepartment of Gastroenterology, Beijing Luhe Hospital Affiliated to Capital Medical University, Beijing, China.
Baohong XuDepartment of Gastroenterology, Beijing Luhe Hospital Affiliated to Capital Medical University, Beijing, China.ORCID 0009-0009-5837-659X

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Endoplasmic reticulum stress (ERS) has been implicated in the pathogenesis of various cancers, including colon cancer, by regulating tumor cell survival, growth, and immune response. However, the specific genes involved in ERS that could serve as prognostic markers in colon cancer remain underexplored. This study aims to identify and validate endoplasmic reticulum stress related genes (ERSRGs) in colon cancer that correlate with patient prognosis, thereby enhancing the understanding of ERS in oncological outcomes and potential therapeutic targeting. We utilized bioinformatics analyses to identify ERSRGs from publicly available colon cancer datasets. Differential expression analysis and survival analysis were performed to assess the prognostic significance of these genes. Validation was conducted through quantitative real-time PCR (RT-qPCR) on selected colon cancer cell lines. Our study identified nine ERS related genes (ASNS, ATF4, ATF6B, BOK, CLU, DDIT3, MANF, SLC39A14, TRAF2) involved in critical pathways including IL-12, PI3K-AKT, IL-7, and IL-23 signaling, and linked to 1-, 3-, and 5-year survival of patients with colon cancer. A multivariate Cox model based on these ERS related genes demonstrated significant prognostic power. Further, TRAF2 strong correlated with immune cells infiltration, suggesting its potential roles in modulating immune responses in the tumor microenvironment. The RT-qPCR validation confirmed the differential expression of these genes in human colon cancer cell lines versus human normal colonic epithelial cell line. The identified ERSRGs could serve as valuable prognostic markers and may offer new insights into the therapeutic targeting of ERS in colon cancer.

Indexed as

Biomarkers, TumorColonic NeoplasmsEndoplasmic Reticulum StressCell Line, TumorFemaleGene Expression ProfilingGene Expression Regulation, NeoplasticHumansMalePrognosisBiomarkers, Tumorbioinformatics analysisColon adenocarcinomaendoplasmic reticulum stressprognostic model

Identifiers

PMID40169935
PMCPMC11970746

What Socratic holds

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LicenceCC BY-NC
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.