Evidence map›Paper›PMID 40176475›Full record

ArticleThe Journal of infectious diseases2025

Bacterial and Viral Coinfections in Adult Patients Hospitalized With COVID-19 Throughout the Pandemic: A Multinational Cohort Study in the EuCARE Project.

Pontus Hedberg, Karol Serwin, Maria Francesca Greco, Joana P V Pereira, Dovile Juozapaite, Sara De Benedittis, Francesca Bai, Nadine Lübke, Tobias Wienemann, Iuri Fanti and 12 more

Abstract readMulticenter Study
In one paragraph

Article in The Journal of infectious diseases, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

22 authors.

Pontus HedbergDepartment of Medicine Huddinge, Karolinska Institutet, Stockholm, Sweden.ORCID 0000-0003-3153-098X
Karol SerwinDepartment of Tropical Infectious Diseases and Immune Deficiency, Pomeranian Medical University in Szczecin, Poland.ORCID 0000-0002-1071-8337
Maria Francesca GrecoDepartment of Health Sciences, Clinic of Infectious Diseases, ASST Santi Paolo E Carlo, University of Milan, Italy.
Joana P V PereiraDepartment of Gastroenterology, Hepatology and Infectious Diseases, Medical Faculty and University Hospital Duesseldorf, Heinrich Heine University, Germany.
Dovile JuozapaiteVilnius Santaros Klinikos Biobank, Vilnius University Hospital Santaros Klinikos, Lithuania.
Sara De BenedittisDepartment of Health Sciences, Clinic of Infectious Diseases, ASST Santi Paolo E Carlo, University of Milan, Italy.ORCID 0009-0004-2802-7114
Francesca BaiDepartment of Health Sciences, Clinic of Infectious Diseases, ASST Santi Paolo E Carlo, University of Milan, Italy.
Nadine LübkeInstitute of Virology, Medical Faculty and University Hospital Düsseldorf, Heinrich Heine University, Düsseldorf, Germany.ORCID 0000-0003-3820-7915
Tobias WienemannInstitute of Medical Microbiology and Hospital Hygiene, Medical Faculty and University Hospital Duesseldorf, Heinrich Heine University, Germany.ORCID 0000-0002-1157-8700
Iuri FantiEuResist Network GEIE, Rome, Italy.
Florian KönigInstitute for Bioinformatics and Medical Informatics and Medical Informatics.
Nico PfeiferInstitute for Bioinformatics and Medical Informatics and Medical Informatics.
Rolf KaiserInstitute of Virology, University of Cologne, Germany.ORCID 0000-0002-2640-2548
Maurizio ZazziDepartment of Medical Biotechnologies, University of Siena, Italy.
Alessandro Cozzi-LepriCentre for Clinical Research, Epidemiology, Modelling and Evaluation, Institute for Global Health UCL, London, United Kingdom.
Daniel NaumovasVilnius Santaros Klinikos Biobank, Vilnius University Hospital Santaros Klinikos, Lithuania.
Giulia MarchettiDepartment of Health Sciences, Clinic of Infectious Diseases, ASST Santi Paolo E Carlo, University of Milan, Italy.
Milosz ParczewskiDepartment of Tropical Infectious Diseases and Immune Deficiency, Pomeranian Medical University in Szczecin, Poland.ORCID 0000-0003-1869-1084
Björn-Erik Ole JensenDepartment of Gastroenterology, Hepatology and Infectious Diseases, Medical Faculty and University Hospital Duesseldorf, Heinrich Heine University, Germany.ORCID 0000-0003-1626-4855
Francesca IncardonaEuResist Network GEIE, Rome, Italy.ORCID 0000-0002-7386-8551
Anders SönnerborgDepartment of Medicine Huddinge, Karolinska Institutet, Stockholm, Sweden.
Pontus NauclérDepartment of Clinical Microbiology, Karolinska University Hospital.

Funding

European UnionHorizon Europe 101046016
6 · The paper itself

Abstract

backgroundLimited evidence exists on how bacterial and viral coinfections have developed since the SARS-CoV-2 Omicron variant emerged. We investigated whether community-onset coinfections in adult patients hospitalized with COVID-19 differed during the wild type, Alpha, Delta, and Omicron periods and whether such coinfections were associated with an increased risk of mortality.

methodsWe conducted a multinational cohort study including COVID-19 hospitalizations until 30 April 2023 in 5 European countries. The outcome was bacterial and viral coinfections based on 5 test modalities. Variant periods were compared with regard to occurrences of coinfections and risk ratios for coinfections (Omicron vs pre-Omicron), as well as association with in-hospital mortality (Omicron vs pre-Omicron).

resultsA total of 29 564 cases were included: 12 601 wild type, 5256 Alpha, 2433 Delta, and 9274 Omicron. The coinfection rate was 2.6% (327/12 601) for wild type, 2.0% (105/5256) for Alpha, 3.2% (77/2433) for Delta, and 7.9% (737/9274) for Omicron. Omicron had a significantly increased risk ratio of coinfection when compared with preceding variants (1.88 [95% CI, 1.53-2.32], P < .001). These results were consistent across several subgroup analyses. An increased occurrence (19% [232/1246] vs 11% [3042/28 318]) and adjusted risk (1.69 [95% CI, 1.49-1.91], P < .001) of in-hospital mortality were observed in patients with a verified coinfection as compared with patients without a coinfection.

conclusionsBacterial and viral coinfections were more prevalent during the Omicron period as compared with preceding variants. Such coinfections were associated with an increased risk of in-hospital mortality, calling for sustained monitoring and clinical vigilance.

Indexed as

Bacterial InfectionsCoinfectionCOVID-19AdultAgedAged, 80 and overCohort StudiesEuropeFemaleHospitalizationHospital MortalityHumansMaleMiddle AgedPandemicsSARS-CoV-2antimicrobial stewardshipcoinfectionCOVID-19mortalitySARS-CoV-2

Identifiers

PMID40176475
PMCPMC12247819

What Socratic holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.