Evidence map›Paper›PMID 40190673›Full record

ArticleAdvanced pharmaceutical bulletin2024

Metabolomic Approach in Anticancer Biomarker Discovery from Foliose Lichens.

Chintya Permata Zahky Sukrisno Putri, Dinar Mutia Rani, Ludmilla Fitri Untari, Banun Kusumawardani, Anang Kurnia, Paul A Keller, Ari Satia Nugraha

Abstract read
In one paragraph

Article in Advanced pharmaceutical bulletin, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Chintya Permata Zahky Sukrisno PutriDrug Utilisation and Discovery Research Group, Faculty of Pharmacy, Universitas Jember, Jember, Indonesia 68121.ORCID https://orcid.org/0000-0002-0695-2091
Dinar Mutia RaniDrug Utilisation and Discovery Research Group, Faculty of Pharmacy, Universitas Jember, Jember, Indonesia 68121.ORCID https://orcid.org/0000-0003-2633-700X
Ludmilla Fitri UntariDepartment of Tropical Biology, Faculty of Biology, Gadjah Mada University, Yogyakarta 55281, Indonesia.ORCID https://orcid.org/0009-0003-0564-0170
Banun KusumawardaniDepartment of Biomedical Sciences, Faculty of Dentistry, University of Jember, Jawa Timur 68121, Indonesia.ORCID https://orcid.org/0000-0002-7296-7435
Anang KurniaDepartment of Statistics, IPB University, Jl. Meranti Wing 22 Level 4 Kampus IPB Darmaga, Bogor - Indonesia 16680.ORCID https://orcid.org/0000-0001-9409-2361
Paul A KellerSchool of Chemistry and Molecular Bioscience, University of Wollongong, Wollongong, New South Wales, 2522, Australia.ORCID https://orcid.org/0000-0003-4868-845X
Ari Satia NugrahaDrug Utilisation and Discovery Research Group, Faculty of Pharmacy, Universitas Jember, Jember, Indonesia 68121.ORCID https://orcid.org/0000-0002-9117-4713

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Purpose: Lichens are well-known as a source of pharmacologically active compounds. This includes anticancer compounds which have biomass constraints including using traditional techniques of lichen bioprospecting. This current study reports the use of cutting-edge metabolomics and a computational approach to discover anticancer biomarkers from Indonesian lichens. Methods: Seven lichen crude extracts were evaluated against cervical cell lines HeLa using a MTT assay and secondary metabolites were profiled and recorded via a gas chromatography-mass spectrometry (GC-MS) protocol. A multivariate analysis orthogonal partial least-squares-discriminant analysis (OPLS-DA) was employed to determine anticancer biomarker of the lichens. A structure-based computational study against the HeLa cancer cell related protein targets (BCL-2 (4MAN), AKT-1 (4GV1), MCL-1 (5FDO), and BRAF (5VAM)) was used to determine the most potent biomarker. Results: The MTT assessment indicated the seven lichens possessed strong, medium and weak cytotoxicity. Multivariate analysis showed an OPLS-DA score plot with distinct separation among the strong, medium and weak cytotoxic groups. The biplot OPLS-DA and GC-MS analysis proposed 13 compounds of Conclusion: The study successfully revealed compound

Indexed as

AnticancerHeLaLichenMetabolomicsP. caroliniana

Identifiers

PMID40190673
PMCPMC11970483

What Socratic holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.