Evidence map›Paper›PMID 40198445›Full record

ArticleMolecular neurobiology2025

Epigenetics and Mitochondrial Biogenesis: The Role of Sirtuins in HIV Neuropathogenesis.

James Haorah, Hemavathi Iyappan, Malaroviyam Samikkannu, Karthick Chennakesavan, Jay P McLaughlin, Thangavel Samikkannu

Abstract read
In one paragraph

Article in Molecular neurobiology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Epigenetic mechanisms of HIV and opioid-induced neuropathology: Potential therapies and interventions.Molecular therapy : the journal of the American Society of Gene Therapy · 2025
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

James HaorahDepartment of Pharmaceutical Sciences, Irma Lerma Rangel College of Pharmacy, Texas a&M University Health Science Center, College Station, TX, 77843, USA.
Hemavathi IyappanDepartment of Pharmaceutical Sciences, Irma Lerma Rangel College of Pharmacy, Texas a&M University Health Science Center, College Station, TX, 77843, USA.
Malaroviyam SamikkannuDepartment of Pharmaceutical Sciences, Irma Lerma Rangel College of Pharmacy, Texas a&M University Health Science Center, College Station, TX, 77843, USA.
Karthick ChennakesavanDepartment of Pharmaceutical Sciences, Irma Lerma Rangel College of Pharmacy, Texas a&M University Health Science Center, College Station, TX, 77843, USA.
Jay P McLaughlinDepartment of Pharmacodynamics, College of Pharmacy, University of Florida, Gainesville, FL, 32610, USA.
Thangavel SamikkannuDepartment of Pharmaceutical Sciences, Irma Lerma Rangel College of Pharmacy, Texas a&M University Health Science Center, College Station, TX, 77843, USA. thangavel@tamu.edu.

Funding

Cocaine and HIV Influence Mitochondrial Epigenetics in Astrocytic NetworksR01DA044872 · NIDA · TEXAS A&M UNIVERSITY HEALTH SCIENCE CTR · PI THANGAVEL, SAMIKKANNU · 2017 to 2021
$2.3M
National Institute of Drug Abuse (NIDA) DA044872NIDA NIH HHS R01 DA044872
6 · The paper itself

Abstract

Mitochondrial energy deficits play a central role in HIV-associated neurocognitive disorder (HAND). HIV disrupts cellular functions, including epigenetic modifications such as class III histone deacetylation mediated by sirtuins (SIRTs). However, the role of SIRTs in HAND pathogenesis remains unclear. We hypothesize that HIV alters mitochondrial biogenesis and energy homeostasis by modifying SIRT family members 1-7, contributing to HAND progression. To test this hypothesis, we examined postmortem frontal lobe brain tissue from people with HIV (PWH) and HIV-negative controls, focusing on epigenetic alterations in SIRTs 1-7, the energy sensor adenosine monophosphate-activated protein kinase (AMPK), the mitochondrial master regulator peroxisome proliferator-activated receptor-γ coactivator-1α (PGC-1α), and transcription factors such as mitochondrial transcription factor A (TFAM), nuclear respiratory factors 1 and 2 (NRF-1/2), and factors associated with oxidative phosphorylation (OXPHOS). Our analysis revealed a significant increase in AMPK, OXPHOS, and PGC-1α levels, alongside a decrease in TFAM levels in PWH brains compared to uninfected controls. NRF-1 was upregulated in mitochondria but downregulated in the cytoplasm, while NRF-2 exhibited the opposite trend in PWH compared to HIV-negative controls. The epigenetic signatures of SIRTs 1, 2, 3, 4, 6, and 7 were upregulated in PWH, while SIRT5 was downregulated compared to uninfected brain tissues. We exposed primary human astrocyte and microglial cultures to the HIV-1 transactivator of transcription (Tat) protein to identify the cell types involved. These studies confirmed that HIV-induced epigenetic modifications of SIRTs and mitochondrial impairments occurred in both astrocytes and microglia, highlighting the crucial role of SIRTs in HAND pathogenesis.

Indexed as

Epigenesis, GeneticHIV InfectionsMitochondriaOrganelle BiogenesisSirtuinsAdultAstrocytesFemaleHumansMaleMicrogliaMiddle AgedOxidative PhosphorylationPeroxisome Proliferator-Activated Receptor Gamma Coactivator 1-alphaPeroxisome Proliferator-Activated Receptor Gamma Coactivator 1-alphaSirtuinsEpigenetic modificationHANDHIVMitochondrial biogenesisSirtuins

Identifiers

PMID40198445
PMCPMC12289736

What Socratic holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.