Evidence map›Paper›PMID 40217156›Full record

ArticleBMC plant biology2025

Physiological and transcriptome analysis of changes in endogenous hormone contents and related synthesis and signaling genes during the heat stress in garlic (Allium sativum L.).

Qing-Qing Yang, Ji-De Fan, Can-Yu Liu, Yong-Qiang Zhao, Zhi-Sheng Xu, Xin-Juan Lu, Jie Ge, Bi-Wei Zhang, Meng-Qian Li, Yan Yang and 1 more

Abstract read
In one paragraph

Article in BMC plant biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Genome-Wide Identification of thePlants (Basel, Switzerland) · 2026
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  6. Comprehensive Identification ofPlants (Basel, Switzerland) · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Qing-Qing YangKey Laboratory of Biology and Genetic Breeding of Sweetpotato, Ministry of Agriculture and Rural Affairs, Xuzhou Institute of Agricultural Sciences in Jiangsu Xuhuai District, Xuzhou, 221131, China.
Ji-De FanKey Laboratory of Biology and Genetic Breeding of Sweetpotato, Ministry of Agriculture and Rural Affairs, Xuzhou Institute of Agricultural Sciences in Jiangsu Xuhuai District, Xuzhou, 221131, China.
Can-Yu LiuKey Laboratory of Biology and Genetic Breeding of Sweetpotato, Ministry of Agriculture and Rural Affairs, Xuzhou Institute of Agricultural Sciences in Jiangsu Xuhuai District, Xuzhou, 221131, China.
Yong-Qiang ZhaoKey Laboratory of Biology and Genetic Breeding of Sweetpotato, Ministry of Agriculture and Rural Affairs, Xuzhou Institute of Agricultural Sciences in Jiangsu Xuhuai District, Xuzhou, 221131, China.
Zhi-Sheng XuState Key Laboratory of Crop Genetics and Germplasm Enhancement, College of Horticulture, Nanjing Agricultural University, Nanjing, China.
Xin-Juan LuKey Laboratory of Biology and Genetic Breeding of Sweetpotato, Ministry of Agriculture and Rural Affairs, Xuzhou Institute of Agricultural Sciences in Jiangsu Xuhuai District, Xuzhou, 221131, China.
Jie GeKey Laboratory of Biology and Genetic Breeding of Sweetpotato, Ministry of Agriculture and Rural Affairs, Xuzhou Institute of Agricultural Sciences in Jiangsu Xuhuai District, Xuzhou, 221131, China.
Bi-Wei ZhangKey Laboratory of Biology and Genetic Breeding of Sweetpotato, Ministry of Agriculture and Rural Affairs, Xuzhou Institute of Agricultural Sciences in Jiangsu Xuhuai District, Xuzhou, 221131, China.
Meng-Qian LiKey Laboratory of Biology and Genetic Breeding of Sweetpotato, Ministry of Agriculture and Rural Affairs, Xuzhou Institute of Agricultural Sciences in Jiangsu Xuhuai District, Xuzhou, 221131, China.
Yan YangKey Laboratory of Biology and Genetic Breeding of Sweetpotato, Ministry of Agriculture and Rural Affairs, Xuzhou Institute of Agricultural Sciences in Jiangsu Xuhuai District, Xuzhou, 221131, China.
Feng YangKey Laboratory of Biology and Genetic Breeding of Sweetpotato, Ministry of Agriculture and Rural Affairs, Xuzhou Institute of Agricultural Sciences in Jiangsu Xuhuai District, Xuzhou, 221131, China. xz-yangfeng@163.com.

Funding

The National Characteristic Vegetable Industry Technology System of China CARS-24- A-07
6 · The paper itself

Abstract

High-temperature stress severely limits the growth, development, yield, and quality of garlic (Allium sativum L.), but the role of hormone signaling in its heat stress response remains unclear. This study examined changes in seven plant hormones and the expression of related genes in garlic leaves ('Xusuan No. 6') under heat stress (38 °C for 0, 2, 4, and 24 h). Growth-promoting hormones, auxin and gibberellic acid, significantly decreased within 2 h of heat stress, while stress-response hormones, including abscisic acid, jasmonic acid, salicylic acid, and ethylene, increased. KEGG pathway analysis revealed significant changes in genes related to hormone biosynthesis and signal transduction, such as NCED and PYR/PYL in the ABA pathway, LOX and OPR in JA biosynthesis, AUX and ARF in IAA signaling, and ERT and ERF in ethylene signaling. A protein-protein interaction network identified 15 hub genes potentially coordinating hormone regulation under heat stress. These findings provide a basis for functional validation of key hormone-related genes in the garlic heat-stress response and suggest potential genetic targets for the development of heat-tolerant garlic varieties.

Indexed as

GarlicHeat-Shock ResponsePlant Growth RegulatorsGene Expression ProfilingGene Expression Regulation, PlantGenes, PlantPlant ProteinsSignal TransductionTranscriptomePlant Growth RegulatorsPlant ProteinsGarlic (Allium sativum L.)Gene expression analysisHigh-temperatureHormoneRNA-seq

Identifiers

PMID40217156
PMCPMC11987441

What Socratic holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.