Evidence map›Paper›PMID 40229524›Full record

ArticleMicrobial ecology2025

Rhizosphere Bacterial Communities Alter in Process to Mycorrhizal Developments of a Mixotrophic Pyrola japonica.

Kohtaro Sakae, Yudai Kitagami, Yosuke Matsuda

Abstract read
In one paragraph

Article in Microbial ecology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Kohtaro SakaeLaboratory of Forest Mycology, Graduate School of Bioresources, Mie University, 1577 Kurimamachiya, Tsu, Mie, 514 - 8507, Japan. kohtarosakae@gmail.com.
Yudai KitagamiLaboratory of Forest Mycology, Graduate School of Bioresources, Mie University, 1577 Kurimamachiya, Tsu, Mie, 514 - 8507, Japan.ORCID http://orcid.org/0000-0002-3947-3556
Yosuke MatsudaLaboratory of Forest Mycology, Graduate School of Bioresources, Mie University, 1577 Kurimamachiya, Tsu, Mie, 514 - 8507, Japan.ORCID http://orcid.org/0000-0002-7001-3101

Funding

Japan Science and Technology Agency JRMJSP2137Japan Science Society 2023-4099Japan Society for the Promotion of Science 24K01796
6 · The paper itself

Abstract

Rhizosphere bacteria work in synergy with mycorrhizal fungi to promote plant growth. The community structure of rhizosphere bacteria may be influenced by continuous changes in fungal associations with host plants. Asiatic herbaceous plant Pyrola japonica (Ericaceae) forms arbutoid mycorrhizas without fungal mantles, with its mycorrhizal development being visually distinguishable at the cellular level. This study aimed to investigate roles of rhizosphere bacteria and their community shifts along with mycorrhizal developments. We examined bacterial communities at three different developmental stages of mycorrhizal roots-limited, full, and digested-via a partial 16S rRNA amplicon sequencing. Both α- and β-diversities in the full condition were significantly lower than those in the limited and digested conditions. Significant clusters of bacterial compositions were found among all treatments. In terms of ecological processes of community assembly, communities in limited conditions and bulk soil were influenced by both deterministic and stochastic processes, whereas those in full and digested conditions were regulated only by stochastic ways. Furthermore, the order Rhizobiales and Actinomycetales known as mycorrhizal helper bacteria were characterized in the full and digested conditions through phylogenetic analysis and detection of indicator taxa. These results suggest that mycorrhizal fungi may play ecologically important roles not only as temporal drivers initiating the formation rhizosphere bacterial communities but also as key founders exerting continuous influences to establish priority effects. Moreover, the rhizosphere bacterial community remains after mycorrhizal degeneration and their historical continuity may contribute to maintaining plant-mycorrhizal fungi-bacterial associations.

Indexed as

BacteriaEricaceaeMicrobiotaMycorrhizaeRhizosphereSoil MicrobiologyBiodiversityDNA, BacterialPhylogenyPlant RootsRNA, Ribosomal, 16SDNA, BacterialRNA, Ribosomal, 16SArbutoid mycorrhizaCommunity assemblyEctomycorrhizal fungusMycorrhizal helper bacterumNext-generation sequencing

Identifiers

PMID40229524
PMCPMC11996954

What Socratic holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.