Evidence map›Paper›PMID 40234450›Full record

ArticleNature communications2025

Crystal structure of Isthmin-1 and reassessment of its functional role in pre-adipocyte signaling.

Tongqing Li, Steven E Stayrook, Wenxue Li, Yueyue Wang, Hengyi Li, Jianan Zhang, Yansheng Liu, Daryl E Klein

Abstract read
In one paragraph

Article in Nature communications, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Tongqing LiDepartment of Pharmacology, Yale School of Medicine, New Haven, CT, USA.ORCID http://orcid.org/0000-0002-5272-4380
Steven E StayrookDepartment of Pharmacology, Yale School of Medicine, New Haven, CT, USA.ORCID http://orcid.org/0000-0002-1677-8293
Wenxue LiDepartment of Pharmacology, Yale School of Medicine, New Haven, CT, USA.ORCID http://orcid.org/0000-0002-8902-0184
Yueyue WangYale Cancer Biology Institute, Yale University, West Haven, CT, USA.
Hengyi LiDepartment of Pharmacology, Yale School of Medicine, New Haven, CT, USA.
Jianan ZhangDepartment of Pharmacology, Yale School of Medicine, New Haven, CT, USA.
Yansheng LiuDepartment of Pharmacology, Yale School of Medicine, New Haven, CT, USA.ORCID http://orcid.org/0000-0002-2626-3912
Daryl E KleinDepartment of Pharmacology, Yale School of Medicine, New Haven, CT, USA. daryl.klein@yale.edu.ORCID http://orcid.org/0000-0002-7188-0450

Funding

User Training and OutreachP30GM124165 · NIGMS · CORNELL UNIVERSITY · PI STEVEN E EALICK · 2018 to 2026
$34.2M
High-Speed High-Sensitivity Detector for X-ray Micro-Crystallography at GM/CA@APSS10OD012289 · OD · UNIVERSITY OF CHICAGO · PI FISCHETTI, ROBERT F. · 2014 to 2014
$2.0M
Pixel Array Detector for X-ray CrystallographyS10RR029205 · NCRR · CORNELL UNIVERSITY · PI EALICK, STEVEN E · 2010 to 2010
$1.8M
NCRR NIH HHS S10 RR029205NIGMS NIH HHS P30 GM124165NIH HHS S10 OD012289
6 · The paper itself

Abstract

Isthmin-1 (ISM1) is a recently described adipokine with insulin-like properties that can control hyperglycemia and liver steatosis. Additionally, ISM1 is proposed to play critical roles in patterning, angiogenesis, vascular permeability, and apoptosis. A key feature of ISM1 is its AMOP (adhesion-associated domain in MUC4 (Mucin-4) and other proteins) domain which is essential for many of its functions. However, the molecular details of AMOP domains remain elusive as there are no descriptions of their structure. Here we determined the crystal structure of ISM1 including its thrombospondin type I repeat (TSR) and AMOP domain. Interestingly, ISM1's AMOP domain exhibits a distinct fold with similarities to bacterial streptavidin. When comparing our structure to predicted structures of other AMOP domains, we observed that while the core streptavidin-like barrel is conserved, the surface helices and loops vary greatly. Thus, the AMOP domain fold allows for structural plasticity that may underpin its diverse functions. Furthermore, and contrary to prior studies, we show that highly purified ISM1 does not stimulate AKT phosphorylation on 3T3-F442A pre-adipocytes. Rather, we find that co-purifying growth factors are responsible for this activity. Together, our data reveal the structure and clarify functional studies of this enigmatic protein.

Indexed as

AdipocytesSignal Transduction3T3-L1 CellsAnimalsCrystallography, X-RayHumansMiceModels, MolecularProtein DomainsProto-Oncogene Proteins c-aktProto-Oncogene Proteins c-akt

Identifiers

PMID40234450
PMCPMC12000326

What Socratic holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.