Evidence map›Paper›PMID 40239683›Full record

ArticleEnvironmental microbiology reports2025

Plasmid pPNptGreen Expression of Green Fluorescent Protein in Pseudomonas chlororaphis Strain S1Bt23 Abrogates Biocontrol Activity Against Pythium ultimum.

Mercy Akuma, Sylvia Ighem Chi, Renlin Xu, Indira Thapa, Barbara Blackwell, James Tabi Tambong

Abstract read
In one paragraph

Article in Environmental microbiology reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Mercy AkumaOttawa Research and Development Centre, Agriculture and Agri-Food Canada, Ottawa, Ontario, Canada.
Sylvia Ighem ChiOttawa Research and Development Centre, Agriculture and Agri-Food Canada, Ottawa, Ontario, Canada.
Renlin XuOttawa Research and Development Centre, Agriculture and Agri-Food Canada, Ottawa, Ontario, Canada.
Indira ThapaOttawa Research and Development Centre, Agriculture and Agri-Food Canada, Ottawa, Ontario, Canada.
Barbara BlackwellOttawa Research and Development Centre, Agriculture and Agri-Food Canada, Ottawa, Ontario, Canada.
James Tabi TambongOttawa Research and Development Centre, Agriculture and Agri-Food Canada, Ottawa, Ontario, Canada.ORCID https://orcid.org/0000-0001-5325-8038

Funding

Agriculture and Agri-Food Canada J-000409Agriculture and Agri-Food Canada J-002272Agriculture and Agri-Food Canada J-002295
6 · The paper itself

Abstract

Pseudomonas chlororaphis is a highly effective plant root coloniser and biocontrol agent. To monitor the colonisation of tomato and canola roots, P. chlororaphis S1Bt23 was transformed with the pPNptGreen plasmid encoding for green fluorescent protein (S1Bt23-GFP). Seedling roots inoculated with S1Bt23-GFP were examined after 2 and 5 h using confocal laser fluorescence microscopy. Roots exposed to S1Bt23-GFP showed pronounced biofilm formation around the root surface, and fluorescing cells were localised in the epidermis and metaxylem after 2 and 5 h of inoculation, respectively. The canola roots also showed upward active translocation of the S1Bt23-GFP cells in xylem vessels in real time. S1Bt23-GFP was also evaluated for antagonistic activity against Pythium ultimum. While S1Bt23 WT exhibited 65.70%-71.4% inhibition of radial growth of Py. ultimum, the S1Bt23-GFP strain did not demonstrate any antagonistic effects. Thin layer chromatography and liquid chromatography mass spectrometry analyses of culture extracts of S1Bt23-GFP did not detect phenazines or pyrrolnitrin, antifungal metabolites identified in S1Bt23 wild type. Expressions of phenazine and pyrrolnitrin genes showed no differences in S1Bt23-GFP and wild type. This suggests that the abrogation of these metabolites occurred post-transcriptionally, probably due to a high cellular molecular load in GFP production. This could negatively impact the ecological fitness of S1Bt23-GFP.

Indexed as

AntibiosisGreen Fluorescent ProteinsPlasmidsPseudomonas chlororaphisPythiumBiofilmsPlant DiseasesPlant RootsSolanum lycopersicumGreen Fluorescent Proteinsbiocontrolconfocal microscopygreen fluorescent proteinphenazinesPseudomonas chlororaphispyrrolnitrinPythium ultimum

Identifiers

PMID40239683
PMCPMC12002801

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.