Evidence map›Paper›PMID 40248366›Full record

ArticleFrontiers in cellular and infection microbiology2025

Metagenomic analysis reveals the diversity of the vaginal virome and its association with vaginitis.

Xiang Lu, Qiang Lu, Rong Zhu, Mingzhong Sun, Hongmei Chen, Zhihu Ge, Yuchen Jiang, Zhipeng Wang, Lingzhi Zhang, Wen Zhang and 1 more

Abstract read
In one paragraph

Article in Frontiers in cellular and infection microbiology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Review
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  7. Multi-omics approaches for image classification in disease diagnosis.Frontiers in cellular and infection microbiology · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Xiang LuDepartment of Laboratory Medicine, School of Medicine, Jiangsu University, Zhenjiang, Jiangsu, China.
Qiang LuDepartment of Clinical Laboratory, Yancheng Third People's Hospital, Affiliated Hospital 6 of Nantong University, The Affiliated Hospital of Jiangsu Medical College, Yancheng, Jiangsu, China.
Rong ZhuDepartment of Clinical Laboratory, Yancheng Third People's Hospital, Affiliated Hospital 6 of Nantong University, The Affiliated Hospital of Jiangsu Medical College, Yancheng, Jiangsu, China.
Mingzhong SunDepartment of Clinical Laboratory, Yancheng Third People's Hospital, Affiliated Hospital 6 of Nantong University, The Affiliated Hospital of Jiangsu Medical College, Yancheng, Jiangsu, China.
Hongmei ChenDepartment of Clinical Laboratory, Yancheng Third People's Hospital, Affiliated Hospital 6 of Nantong University, The Affiliated Hospital of Jiangsu Medical College, Yancheng, Jiangsu, China.
Zhihu GeDepartment of Clinical Laboratory, Yancheng Third People's Hospital, Affiliated Hospital 6 of Nantong University, The Affiliated Hospital of Jiangsu Medical College, Yancheng, Jiangsu, China.
Yuchen JiangDepartment of Clinical Laboratory, Yancheng Third People's Hospital, Affiliated Hospital 6 of Nantong University, The Affiliated Hospital of Jiangsu Medical College, Yancheng, Jiangsu, China.
Zhipeng WangDepartment of Clinical Laboratory, Yancheng Third People's Hospital, Affiliated Hospital 6 of Nantong University, The Affiliated Hospital of Jiangsu Medical College, Yancheng, Jiangsu, China.
Lingzhi ZhangDepartment of Clinical Laboratory, Yancheng Third People's Hospital, Affiliated Hospital 6 of Nantong University, The Affiliated Hospital of Jiangsu Medical College, Yancheng, Jiangsu, China.
Wen ZhangDepartment of Laboratory Medicine, School of Medicine, Jiangsu University, Zhenjiang, Jiangsu, China.
Ziyuan DaiDepartment of Clinical Laboratory, Yancheng Third People's Hospital, Affiliated Hospital 6 of Nantong University, The Affiliated Hospital of Jiangsu Medical College, Yancheng, Jiangsu, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Introduction: The human vaginal virome is an essential yet understudied component of the vaginal microbiome. Its diversity and potential contributions to health and disease, particularly vaginitis, remain poorly understood. Methods: We conducted metagenomic sequencing on 24 pooled vaginal swab libraries collected from 267 women, including both healthy individuals and those diagnosed with vaginitis. Viral community composition, diversity indices (Shannon, Richness, and Pielou), and phylogenetic characteristics were analyzed. Virus-host associations were also investigated. Results: DNA viruses dominated the vaginal virome. Discussion: These findings provide new insights into the composition and structure of the vaginal virome and its potential association with vaginal dysbiosis. The distinct virome characteristics observed in women with vaginitis highlight the relevance of viral communities in reproductive health. Future studies incorporating individual-level sequencing and metatranscriptomics are warranted to explore intra-host viral dynamics, assess viral activity, and clarify the functional roles of vaginal viruses in host-microbiome interactions.

Indexed as

MetagenomicsVaginaVaginitisViromeVirusesAdultBacteriaBacteriophagesBiodiversityFemaleHumansMicrobiotaMiddle AgedPhylogenyYoung Adultanellovirusbacteriophagemetagenomicspapillomavirusvaginitis

Identifiers

PMID40248366
PMCPMC12003417

What Socratic holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.