Evidence map›Paper›PMID 40255693›Full record

ArticleInternational journal of chronic obstructive pulmonary disease2025

Identification of Cuproptosis-Related Genes and Their Potential Role in COPD Pathogenesis: A Bioinformatics Analysis.

Qin Shen, Jin-Bo Huang, Mi Zhu, Dao-Jun Ji, Si-Jia Huang, Jun Li

Abstract read
In one paragraph

Article in International journal of chronic obstructive pulmonary disease, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

6 authors.

Qin Shen *Department of Respiratory and Critical Care Medicine, Affiliated Hospital of Nantong University, Nantong Key Laboratory of Respiratory Medicine, Nantong, Jiangsu, 226001, People's Republic of China.ORCID 0009-0006-6489-448X
Jin-Bo Huang *Department of Respiratory and Critical Care Medicine, Affiliated Hospital of Nantong University, Nantong Key Laboratory of Respiratory Medicine, Nantong, Jiangsu, 226001, People's Republic of China.
Mi Zhu *Department of Pulmonary and Critical Care Medicine, Changshu No.1 People's Hospital, Jiangsu, People's Republic of China.
Dao-Jun JiMedical School of Nantong University, Nantong, Jiangsu, 226001, People's Republic of China.
Si-Jia HuangMedical School of Nantong University, Nantong, Jiangsu, 226001, People's Republic of China.
Jun LiDepartment of Respiratory and Critical Care Medicine, Affiliated Hospital of Nantong University, Nantong Key Laboratory of Respiratory Medicine, Nantong, Jiangsu, 226001, People's Republic of China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: Chronic obstructive pulmonary disease (COPD) is a leading cause of death worldwide, and its pathogenesis and potentially relevant biomarkers require further study. Imbalance in copper (Cu Methods: A dataset relevant to COPD was downloaded from Gene Expression Omnibus database, among which a total of 18 cuproptosis-related genes (CRGs) were screened. The SimDesign package was used to perform single-factor Rogers regression to screen genes associated with disease phenotypes, risk score prediction models were constructed, and Receiver Operating Characteristic (ROC) curves were used to evaluate the efficacy of the prediction models. In addition, we verified the expression of CRGs in subtypes and the correlation between subtypes and clinical characteristics using a database. Finally, immune correlation analysis was used to explore immune cell infiltration. Results: Five biomarkers (DLST, GLS, LIPT1, MTF1, and PDHB) were identified. ROC analysis illustrated that these five biomarkers performed well (area under the curve (AUCs)>0.7), and the enrichment scores of diagnostic CRGs were significantly different among subtypes, among which the chi-square test P-values of the age groups were significantly different. The immune infiltration evaluation of cuproptosis subtypes revealed that the correlation analysis results of 22 types of immune cells showed a significant correlation between these cells, and the five CRGs were significantly correlated with the content of most immune cells in the 22 types of immune cells. The four pathways with the most significant differences in GSEA among subtypes were Oxidative Phosphorylation, Parkinson's Disease, Purine Metabolism, and Drug Metabolism Cytochrome P450. Conclusion: This study identified five candidate genes for further investigation (DLST, GLS, LIPT1, MTF1, and PDHB) and constructed disease prediction models and pathogenesis pathways. This study can provide a basis for further research on the role of cuproptosis in COPD.

Indexed as

Computational BiologyCopperPulmonary Disease, Chronic ObstructiveAgedDatabases, GeneticFemaleGene Expression ProfilingGenetic Predisposition to DiseaseHumansMaleMiddle AgedPhenotypeRisk FactorsCopperchronic obstructive pulmonary diseasecuproptosisgene expression

Identifiers

PMID40255693
PMCPMC12009119

What Socratic holds

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.