Evidence map›Paper›PMID 40257225›Full record

ArticleJournal of chemical information and modeling2025

Role of Residues Undergoing Hereditary Spastic Paraplegias Mutations: Insights from Simulating the Spiral to Ring Transition in Katanin.

Maria S Kelly, Riccardo Capelli, Ruxandra I Dima, Paolo Carloni

Abstract read
In one paragraph

Article in Journal of chemical information and modeling, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Maria S KellyDepartment of Chemistry, University of Cincinnati, Cincinnati, Ohio 45221, United States.
Riccardo CapelliDepartment of Biosciences, Università degli Studi di Milano, 20133 Milano, Italy.ORCID 0000-0001-9522-3132
Ruxandra I DimaDepartment of Chemistry, University of Cincinnati, Cincinnati, Ohio 45221, United States.
Paolo CarloniINM-9, Forschungszentrum Jülich, 52428 Jülich, Germany.ORCID 0000-0002-9010-0149

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Several dozen mutations in the M87 isoform of the spastin enzyme have been associated with mobility impairment in hereditary spastic paraplegias. Some of them impact the structural determinants of two functional conformations of the protein: spiral and ring. Here we investigate the possible patterns between these disease-related residues in spastin and aligned regions in the closely related protein katanin toward their role in the transition of the two conformations, which is essential for both enzymes' function. By performing a variety of molecular simulations (including metadynamics) on katanin, we suggest that about one-fourth of the known M87 spastin disease-associated mutations also affect the interconversion and/or the stability of a previously unrecognized intermediate of the katanin transition. The protocol used here can be applied to the study of conformational changes in other large biomolecular complexes.

Indexed as

Molecular Dynamics SimulationMutationSpastic Paraplegia, HereditaryHumansKataninProtein ConformationSpastinKataninSpastin

Identifiers

PMID40257225
PMCPMC12076492

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.