ArticleThe New phytologist2025
Single-cell multiome reveals root hair-specific responses to salt stress.
Article in The New phytologist, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.
What it found
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The trial behind it
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Who cites it
14 citing papers in PubMed.
- Cell-based crop phenotyping for future climates.The New phytologist · 2026Review
- Stable lineages, rewired landscapes: single-cell and spatial multi-omics reveal developmental plasticity under abiotic stress.The New phytologist · 2026Review
- Multi-organ single-cell transcriptomic atlas identifies QrIAA14 as a candidate negative regulator of adventitious root development in Quercus robur.PLoS genetics · 2026Article
- Single-Cell and Spatial Omics Technologies in Rice Abiotic Stress Biology: A Methodological Review.International journal of molecular sciences · 2026Review
- Single-cell insights into plant growth, adaptation, and evolution.Journal of integrative plant biology · 2026Review
- Single-nucleus RNA-seq and ATAC-seq analyses provide molecular insights into cadmium-stress response in alfalfa roots.Horticulture research · 2026Article
- Single-nucleus RNA sequencing reveals a spatiotemporal pattern of HScience China. Life sciences · 2026Article
- Decoding plant physiology through systems biology: Integrative multi-omics and computational perspectives for next-generation crop design.Plant communications · 2026Review
- Cell-Type-Specific and Variety-Specific Responses to Salt Stress in Wheat Root Revealed by Single-Cell Transcriptomics.Plant biotechnology journal · 2026Article
- Correlative Transcriptome and Metabolome Analysis of the Maize Shoot Response to Salt Stress.Plants (Basel, Switzerland) · 2025Article
- Next-generation translational genomics for developing future crops.Functional & integrative genomics · 2025Review
- Multiomic analyses reveal transcription factors involved in the fatty acid biosynthesis pathway under cold stress in upland cotton (Frontiers in plant science · 2025Article
- Exogenous putrescine enhances salt tolerance inFrontiers in plant science · 2025Article
- Transcriptomic landscapes of ornamental plants under salt and drought stress: key genes and pathways for tolerance.Frontiers in plant science · 2025Review
Corrections and comments
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Authors and funding
14 authors.
Funding
Abstract
Soil salinization, exacerbated by environmental deterioration and improper cultivation, is a major challenge for sustainable agriculture. The root is the primary organ in plants to perceive and respond to salt stress. Utilizing single-cell sequencing, we have created the first single-cell transcriptional and chromatin accessibility landscape for normal and salt-stressed root tips in non-heading Chinese cabbage (NHCC). Our study reveals that salt stress disrupts the normal differentiation of root hairs, leaving many in an undifferentiated state and preventing stress response gene expression. Inter-species analyses show that both salt and osmotic stresses inhibit root hair differentiation and elongation similarly, resulting in fewer, malfunctioning root hairs. We found that high salinity affects root hair iron transport. Salt stress-responsive genes, cell type-specific transcriptional regulatory networks, and trajectory curves are linked to iron transport. Specifically, the expression of BcIRT2, a metal transporter gene, is influenced by salt stress. Silencing BcIRT2 causes chlorotic leaves and increases salt sensitivity, reducing iron content in NHCC roots. Our findings offer significant insights into plant salt stress responses and provide valuable information for breeding salt-tolerant NHCC and other crops.
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What Socratic holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.