Evidence map›Paper›PMID 40295503›Full record

ArticleNature communications2025

O-Fucosyltransferase SPINDLY attenuates auxin-induced fruit growth by inhibiting ARF6/8-coactivator mediator complex interaction in Arabidopsis.

Yan Wang, Seamus Kelley, Rodolfo Zentella, Jianhong Hu, Hua Wei, Lei Wang, Jeffrey Shabanowitz, Donald F Hunt, Tai-Ping Sun

Abstract read
In one paragraph

Article in Nature communications, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Yan WangDepartment of Biology, Duke University, Durham, NC, 27708, USA.ORCID http://orcid.org/0000-0003-3262-9930
Seamus KelleyDepartment of Chemistry, University of Virginia, Charlottesville, VA, 22904, USA.ORCID http://orcid.org/0009-0008-7589-0075
Rodolfo ZentellaDepartment of Biology, Duke University, Durham, NC, 27708, USA.ORCID http://orcid.org/0000-0003-3986-6250
Jianhong HuDepartment of Biology, Duke University, Durham, NC, 27708, USA.ORCID http://orcid.org/0000-0003-3927-9240
Hua WeiKey Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, Beijing, 100093, China.
Lei WangKey Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, Beijing, 100093, China.ORCID http://orcid.org/0000-0002-4912-5387
Jeffrey ShabanowitzDepartment of Chemistry, University of Virginia, Charlottesville, VA, 22904, USA.ORCID http://orcid.org/0000-0001-5750-3539
Donald F HuntDepartment of Chemistry, University of Virginia, Charlottesville, VA, 22904, USA.ORCID http://orcid.org/0000-0003-2815-6368
Tai-Ping SunDepartment of Biology, Duke University, Durham, NC, 27708, USA. tps@duke.edu.ORCID http://orcid.org/0000-0001-5223-2936

Funding

PROTEIN SEQUENCING BY TANDEM MASS SPECTROMETRYR01GM037537 · NIGMS · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI HUNT, DONALD F · 1987 to 2023
$17.8M
Structure and Function Analyses of DELLA Interacting Proteins in ArabidopsisR01GM100051 · NIGMS · DUKE UNIVERSITY · PI SUN, TAI-PING · 2012 to 2021
$2.4M
Structural and Functional Analysis of Nucleocytoplasmic Protein O-Glycosyltransferases in PlantsR01GM150029 · NIGMS · DUKE UNIVERSITY · PI Tai-Ping Sun, Pei Zhou · 2023 to 2026
$1.9M
NIGMS NIH HHS R01 GM037537NIGMS NIH HHS R01 GM100051NIGMS NIH HHS R01 GM150029United States Department of Agriculture | Agricultural Research Service (USDA Agricultural Research Service) 2023-67013-39532U.S. Department of Health & Human Services | National Institutes of Health (NIH) GM037537U.S. Department of Health & Human Services | National Institutes of Health (NIH) GM100051U.S. Department of Health & Human Services | National Institutes of Health (NIH) GM150029
6 · The paper itself

Abstract

The phytohormone auxin plays a pivotal role in promoting fruit initiation and growth upon fertilization in flowering plants. Upregulation of auxin signaling by genetic mutations or exogenous auxin treatment can induce seedless fruit formation from unpollinated ovaries, termed parthenocarpy. Recent studies suggested that the class A AUXIN RESPONSE FACTOR6 (ARF6) and ARF8 in Arabidopsis play dual functions by first inhibiting fruit initiation when complexed with unidentified corepressor IAA protein(s) before pollination, and later promoting fruit growth after fertilization as ARF dimers. However, whether and how posttranslational modification(s) regulate ARF6- and ARF8-mediated fruit growth were unknown. In this study, we reveal that both ARF6 and ARF8 are O-fucosylated in their middle region (MR) by SPINDLY (SPY), a unique nucleocytoplasmic protein O-fucosyltransferase, which catalyzes the addition of a fucose moiety to specific Ser/Thr residues of target proteins. Epistasis, biochemical and transcriptome analyses indicate that ARF6 and ARF8 are downstream of SPY, but ARF8 plays a more predominant role in parthenocarpic fruit growth. Intriguingly, two ARF6/8-interacting proteins, the co-repressor IAA9 and MED8, a subunit of the coactivator Mediator complex, are also O-fucosylated by SPY. Biochemical assays demonstrate that SPY-mediated O-fucosylation of these proteins reduces ARF-MED8 interaction, which leads to enhanced transcription repression activity of the ARF6/8-IAA9 complex but impaired transactivation activities of ARF6/8. Our study unveils the role of protein O-fucosylation by SPY in attenuating auxin-triggered fruit growth through modulation of activities of key transcription factors, a co-repressor and the coactivator MED complex.

Indexed as

ArabidopsisArabidopsis ProteinsDNA-Binding ProteinsFruitIndoleacetic AcidsTranscription FactorsGene Expression Regulation, PlantArabidopsis Proteinsauxin response factor 6, Arabidopsisauxin response factor 8, ArabidopsisDNA-Binding ProteinsIndoleacetic AcidsTranscription Factors

Identifiers

PMID40295503
PMCPMC12037827

What Socratic holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.