Evidence map›Paper›PMID 40295577›Full record

ArticleScientific data2025

The First Genome Assembly Of The Dogwhelk Nucella lapillus, a Bioindicator Species For The Marine Environment.

Juned Kadiwala, Andrew Hesketh, Heleen De Weerd, Helen Ritch, Rameen Shakur

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Article in Scientific data, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Juned Kadiwala *Brighton Integrative Genomics (BIG) Unit and the Centre for Precision Health and Translational Medicine, School of Applied Sciences, University of Brighton, Brighton, BN2 6DN, UK.
Andrew Hesketh *Brighton Integrative Genomics (BIG) Unit and the Centre for Precision Health and Translational Medicine, School of Applied Sciences, University of Brighton, Brighton, BN2 6DN, UK.ORCID http://orcid.org/0000-0001-5220-8733
Heleen De WeerdEdinburgh Genomics, The University of Edinburgh, Ashworth Laboratories, The King's Buildings, Charlotte Auerbach Road, Edinburgh, EH9 3FL, UK.ORCID http://orcid.org/0009-0000-4969-1429
Helen RitchEdinburgh Genomics, The University of Edinburgh, Ashworth Laboratories, The King's Buildings, Charlotte Auerbach Road, Edinburgh, EH9 3FL, UK.
Rameen ShakurBrighton Integrative Genomics (BIG) Unit and the Centre for Precision Health and Translational Medicine, School of Applied Sciences, University of Brighton, Brighton, BN2 6DN, UK. r.shakur@brighton.ac.uk.ORCID https://orcid.org/0000-0001-5515-2296

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The dogwhelk (Nucella lapillus) is a predatory marine gastropod widely distributed across temperate intertidal zones. Renowned for its ecological role in controlling prey populations, N. lapillus is also an important bioindicator species for marine pollution through imposex. The molecular genetic basis of imposex, characterised by the abnormal development of male sex organs in females and reductions in fertility and lifespan, however remains poorly understood due to the absence of a reference genome sequence. Here we provide the first genome assembly comprising 2.41 Gb of sequence, predicted to encode 47,238 proteins. This inaugural assembly lays the foundations for implementing genomic approaches to better quantify and characterise imposex, in addition to elucidating adaptations to life within changeable intertidal ecosystems. To counter challenges of DNA fragmentation and contamination often associated with the sequencing of marine organisms, we found that a hybrid approach that integrates complementary long-read data from PacBio HiFi and Oxford Nanopore Technology (ONT) platforms helped maximise the final assembly. This innovative combination may be a useful approach for similar marine species.

Indexed as

GastropodaGenomeAnimalsFemale

Identifiers

PMID40295577
PMCPMC12037820

What Socratic holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.