Evidence map›Paper›PMID 40303049›Full record

ArticleTransboundary and emerging diseases2024

A RFLP 1-4-3 L1C Variant of PRRSV-2 Isolated in Sichuan Province, China: Genetic Characterization and Pathogenicity.

Li-Shuang Deng, Zhi-Jie Jian, Yuan-Meng Wang, Bing-Zhou Huang, Tong Xu, Feng-Qin Li, Si-Yuan Lai, Yan-Ru Ai, Jian-Bo Huang, Zhi-Wen Xu and 1 more

Abstract read
In one paragraph

Article in Transboundary and emerging diseases, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Li-Shuang DengCollege of Veterinary Medicine, Sichuan Agricultural University, Chengdu, China.
Zhi-Jie JianCollege of Veterinary Medicine, Sichuan Agricultural University, Chengdu, China.
Yuan-Meng WangCollege of Veterinary Medicine, Sichuan Agricultural University, Chengdu, China.
Bing-Zhou HuangCollege of Veterinary Medicine, Sichuan Agricultural University, Chengdu, China.
Tong XuCollege of Veterinary Medicine, Sichuan Agricultural University, Chengdu, China.
Feng-Qin LiCollege of Veterinary Medicine, Sichuan Agricultural University, Chengdu, China.
Si-Yuan LaiCollege of Veterinary Medicine, Sichuan Agricultural University, Chengdu, China.
Yan-Ru AiCollege of Veterinary Medicine, Sichuan Agricultural University, Chengdu, China.
Jian-Bo HuangCollege of Veterinary Medicine, Sichuan Agricultural University, Chengdu, China.
Zhi-Wen XuCollege of Veterinary Medicine, Sichuan Agricultural University, Chengdu, China.ORCID https://orcid.org/0000-0002-9508-6593
Ling ZhuCollege of Veterinary Medicine, Sichuan Agricultural University, Chengdu, China.ORCID https://orcid.org/0000-0002-2682-3465

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Porcine reproductive and respiratory syndrome virus (PRRSV), known for causing reproductive disorders in sows and respiratory issues in piglets, poses a significant threat to the global swine industry. Since its initial report in 2013, the L1C (lineage 1.8/NADC30-like) PRRSV has drawn significant attention in China due to its high recombination potential and diverse pathogenicity. This study focuses on a naturally occurring recombinant L1C variant, SCABTC-202302, characterized by an restriction fragment length polymorphism (RFLP) pattern of 1-4-3. We investigate the strain's genetic evolution, recombination, pathogenicity, and immune and antibody responses. Phylogenetic analysis of the ORF5 (open reading frame) gene classified the SCABTC-202302 strain as lineage 8.7, while whole-genome analysis categorized it as L1C. Notably, a discontinuous deletion of 131 amino acids (AAs) was observed in the NSP2 gene, along with specific AA mutations in ORF5. Recombination analysis revealed the NADC30 strain as the primary parent, with contributions from the JXA1 strain in the ORF2-ORF7 region. The strain caused lung and lymph node damage, sustained high-level viremia, and elevated inflammatory factors in infected piglets. Our study provides valuable insights into the genetic characteristics, pathogenicity, and immunological profile of L1C strains, contributing to the development of vaccines and control measures for PRRSV.

Indexed as

Polymorphism, Restriction Fragment LengthPorcine Reproductive and Respiratory SyndromePorcine respiratory and reproductive syndrome virusAnimalsChinaPhylogenySwineVirulencecytokineL1C variantpathogenicityphylogenetic analysisPRRSVrecombination analysis

Identifiers

PMID40303049
PMCPMC12017144

What Socratic holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.