Evidence map›Paper›PMID 40316638›Full record

ArticleScientific reports2025

Role of genetic modifiers on pulmonary consequences of cancer therapy in children.

Shoshana Leftin Dobkin, Xiao Chang, Frank Mentch, Hakon Hakonarson

Abstract read
In one paragraph

Article in Scientific reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Shoshana Leftin DobkinDivision of Pulmonary Medicine, The Hub for Clinical Collaboration, Children's Hospital of Philadelphia, 3501 Civic Center Boulevard, Philadelphia, PA, 19104-4318, USA. leftindobs@chop.edu.
Xiao ChangCenter for Applied Genomics, Children's Hospital of Philadelphia, 3615 Civic Center Boulevard, Suite 1216, Philadelphia, PA, 19104-4318, USA.
Frank MentchCenter for Applied Genomics, Children's Hospital of Philadelphia, 3615 Civic Center Boulevard, Suite 1216, Philadelphia, PA, 19104-4318, USA.
Hakon HakonarsonDivision of Pulmonary Medicine, The Hub for Clinical Collaboration, Children's Hospital of Philadelphia, 3501 Civic Center Boulevard, Philadelphia, PA, 19104-4318, USA. hakonarson@email.chop.edu.

Funding

Postdoctoral Training Program in Genomic MedicineT32HG009495 · NHGRI · UNIVERSITY OF PENNSYLVANIA · PI Katherine L. Nathanson, Bogdan Pasaniuc · 2017 to 2026
$4.2M
NHGRI NIH HHS T32 HG009495
6 · The paper itself

Abstract

Childhood cancer survivors (CCS) often face late-onset adverse effects, with pulmonary complications being particularly common. In this study, we analyzed 104 CCS with pulmonary issues post-treatment using a genome-wide association study (GWAS) to identify genetic susceptibility markers. Among the cohort, 20% were diagnosed with interstitial lung disease (ILD), while other complications included pulmonary fibrosis (3%) and bronchiolitis obliterans (3%). Pulmonary function test (PFT) impairments were present in 74% of patients, with symptoms such as exertional dyspnea (14%) and chronic cough (9%). Imaging revealed bronchiectasis in 7% of patients. Although no genome-wide significant loci were identified, several loci of suggestive significance were detected, including rs6804526 (P = 6.21 × 10-5) and rs117985268 (P = 2.98 × 10-5), which are previously associated with breast cancer and respiratory failure, respectively. Additionally, copy number variation (CNV) analysis identified a 21q22.3 deletion in one patient, a region linked to lung cancer. While no genome-wide significant loci were found, these suggestive loci and CNV findings highlight potential genetic modifiers of pulmonary risk in CCS, warranting further investigation in larger cohorts to confirm these associations.

Indexed as

Genes, ModifierLung Diseases, InterstitialNeoplasmsAdolescentCancer SurvivorsChildChild, PreschoolDNA Copy Number VariationsFemaleGenetic Predisposition to DiseaseGenome-Wide Association StudyHumansMalePolymorphism, Single NucleotideRespiratory Function Tests

Identifiers

PMID40316638
PMCPMC12048474

What Socratic holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.