Evidence map›Paper›PMID 40328420›Full record

ArticleMagnetic resonance imaging2025

Accelerated ultrashort echo time quantitative magnetization transfer (UTE-qMT) imaging of macromolecular fraction (MMF) in cortical bone based on a self-attention convolutional neural network.

Kevin Du, Harry Tang, Jiyo Athertya, Yidan Wang, Megan Hu, Avery Wang, Saeed Jerban, Soo Hyun Shin, Yajun Ma, Christine B Chung and 1 more

Abstract read
In one paragraph

Article in Magnetic resonance imaging, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Kevin DuDepartment of Radiology, University of California, San Diego, CA, USA.
Harry TangDepartment of Radiology, University of California, San Diego, CA, USA.
Jiyo AthertyaDepartment of Radiology, University of California, San Diego, CA, USA.
Yidan WangDepartment of Radiology, University of California, San Diego, CA, USA.
Megan HuDepartment of Radiology, University of California, San Diego, CA, USA.
Avery WangDepartment of Radiology, University of California, San Diego, CA, USA.
Saeed JerbanDepartment of Radiology, University of California, San Diego, CA, USA.
Soo Hyun ShinDepartment of Radiology, University of California, San Diego, CA, USA.
Yajun MaDepartment of Radiology, University of California, San Diego, CA, USA.
Christine B ChungDepartment of Radiology, University of California, San Diego, CA, USA; Radiology Service, Veterans Affairs San Diego Healthcare System, San Diego, CA, USA.
Eric Y ChangDepartment of Radiology, University of California, San Diego, CA, USA; Radiology Service, Veterans Affairs San Diego Healthcare System, San Diego, CA, USA. Electronic address: e8chang@health.ucsd.edu.

Funding

Ultrashort Echo Time (UTE) Magnetic Resonance Imaging of BoneR01AR068987 · NIAMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI DU, JIANG · 2015 to 2024
$4.9M
Quantitative UTE MR Imaging: Sensitive Biomarkers for OsteoarthritisR01AR062581 · NIAMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI DU, JIANG · 2013 to 2022
$4.1M
Resource-based Center for the study of the joint microenvironment in rheumatology (Overall Application)P30AR073761 · NIAMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI CORR, MARY P · 2018 to 2022
$3.9M
Ultrashort Echo Time Magnetic Resonance Imaging of the Lumbar Intervertebral Disc.R01AR079484 · NIAMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI Yajun Ma · 2022 to 2026
$2.7M
Three-dimensional Ultrashort Echo Time Magnetic Resonance Imaging of EnthesesR01AR075825 · NIAMS · VETERANS MEDICAL RESEARCH FDN/SAN DIEGO · PI CHANG, ERIC Y · 2019 to 2023
$1.8M
Knee evaluation under mechanical loading by cones ultrashort echo time MR imagingK01AR080257 · NIAMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI saeed jerban · 2022 to 2026
$602k
BLRD VA I01 BX005952CSRD VA I01 CX000625NIAMS NIH HHS K01 AR080257NIAMS NIH HHS P30 AR073761NIAMS NIH HHS R01 AR062581NIAMS NIH HHS R01 AR068987NIAMS NIH HHS R01 AR075825NIAMS NIH HHS R01 AR079484
6 · The paper itself

Abstract

purposeTo combine ultrashort echo time quantitative magnetization transfer (UTE-qMT) imaging with a self-attention convolutional neural network (SAT-Net) for accelerated mapping of macromolecular fraction (MMF) in cortical bone. MATERIALS AND

methodsThis institutional review board-approved study involved 31 young female subjects (young control, <45 years) and 50 postmenopausal subjects (6 normal (old control), 14 with osteopenia (osteopenia group), and 30 with osteoporosis (OP group)). After written informed consent was obtained from each subject, 15 UTE-qMT images of the tibial midshaft were acquired with three saturation powers (500°, 1000°, and 1500°) and five frequency offsets (2, 5, 10, 20, and 50 kHz) for each power to estimate the baseline MMF using a two-pool model. The densely connected SAT-Net model was used to predict bone MMF maps based on seven evenly distributed UTE-qMT images, which were well separated in terms of MT powers and frequency offsets (namely 5 and 20 kHz for 500° and 1500°, and 2, 10, 50 kHz for 1000°). Errors relative to the baseline MMF were calculated. Linear regression was used to assess the performance of the SAT-Net model. The mean MMF values for different groups were calculated.

resultsConventional two-pool modeling of seven evenly distributed UTE-qMT input images shows a significant relative error of ∼34 %. In comparison, the SAT-Net model accurately predicted MMF values for the tibial midshafts of 81 human subjects with a high correlation (R

conclusionWhile it is difficult to accelerate MMF mapping in bone using conventional two-pool modeling, the SAT-Net model allows accurate MMF mapping with a substantial reduction in the number of UTE-qMT input images. UTE-qMT with SAT-Net makes clinical evaluation of bone matrix possible.

Indexed as

Cortical BoneImage Processing, Computer-AssistedMagnetic Resonance ImagingNeural Networks, ComputerAdultAlgorithmsBone Diseases, MetabolicConvolutional Neural NetworksFemaleHumansMiddle AgedOsteoporosisTibiaYoung AdultBoneMMFMRIOPSAT-netUTE-qMT

Identifiers

PMID40328420
PMCPMC12136982

What Socratic holds

Textmetadata
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.