Evidence map›Paper›PMID 40329166›Full record

ArticleBMC genomics2025

The complete mitochondrial genome of Sinojackia microcarpa: evolutionary insights and gene transfer.

Tailin Zhong, Shijie Huang, Rongxiu Liu, Juan Zhuo, Haifei Lu, Chunlin Gan, Jun Fu, Qixia Qian

Abstract read
In one paragraph

Article in BMC genomics, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Tailin Zhong *College of Urban Construction of Zhejiang Shuren University, Key Laboratory of Pollution Exposure and Health Intervention of Zhejiang Province, Zhejiang Shuren University, Shaoxing, Zhejiang, People's Republic of China.
Shijie Huang *National Key Laboratory for Development and Utilization of Forest Food Resources, Zhejiang A&F University, Hangzhou, 311300, China.
Rongxiu LiuNational Key Laboratory for Development and Utilization of Forest Food Resources, Zhejiang A&F University, Hangzhou, 311300, China.
Juan ZhuoNational Key Laboratory for Development and Utilization of Forest Food Resources, Zhejiang A&F University, Hangzhou, 311300, China.
Haifei LuCollege of Urban Construction of Zhejiang Shuren University, Key Laboratory of Pollution Exposure and Health Intervention of Zhejiang Province, Zhejiang Shuren University, Shaoxing, Zhejiang, People's Republic of China.
Chunlin GanLishan Forest Farm, Xin'gan County, Xin'gan, Jiangxi, People's Republic of China.
Jun FuState-owned Paiyangshan Forest Farm in Guangxi Zhuang Autonomous Region, Ningming, Guangxi, People's Republic of China.
Qixia QianCollege of Landscape Architecture, Zheiiang A&F University, Hangzhou, 311300, China. Qian023456@163.com.

Funding

Key Specialty Project of Ordinary Colleges and Universities SXSZY202412Off-campus practice education base for design majors of Zhejiang Shuren University SRSJJD2024005the Basic Public Welfare Research Projects of Zhejiang province LGN21C160015
6 · The paper itself

Abstract

backgroundAs a dicotyledonous plant within the Styracaceae family, Sinojackia microcarpa (S. microcarpa) is notable for its library-shaped fruit and sparse distribution, serving as a model system for studying the entire tree family. However, the scarcity of genomic data, particularly concerning the mitochondrial and nuclear sequences of S. microcarpa, has substantially impeded our understanding of its evolutionary traits and fundamental biological mechanisms.

resultsThis study presents the first complete mitochondrial genome sequence of S. microcarpa and conducts a comparative analysis of its protein-encoding genes across eight plant species. Our analysis revealed that the mitochondrial genome of S. microcarpa spans 687,378 base pairs and contains a total of 59 genes, which include 37 protein-coding genes (PCGs), 20 transfer RNA (tRNA) genes, and 2 ribosomal RNA (rRNA) genes. Sixteen plastid-derived fragments strongly linked with mitochondrial genes, including one intact plastid-related gene (rps7), were identified. Additionally, Ka/Ks ratio analysis revealed that most mitochondrial genes are under purifying selection, with a few genes, such as nad9 and ccmB, showing signs of relaxed or adaptive evolution. An analysis of twenty-nine protein-coding genes from twenty-four plant species reveals that S. microcarpa exhibits a closer evolutionary relationship with species belonging to the genus Camellia. The findings of this study provide new genomic data that enhance our understanding of S. microcarpa, and reveal its mitochondrial genome's evolutionary proximity to other dicotyledonous species.

conclusionsOverall, this research enhances our understanding of the evolutionary and comparative genomics of S. microcarpa and other plants in the Styracaceae family and lays the foundation for future genetic studies and evolutionary analyses in the Styracaceae family.

Indexed as

Evolution, MolecularGenome, MitochondrialGenomicsPhylogenyRNA, TransferRNA, TransferGene transferMitochondria genomePhylogenetic analysisSinojackia microcarpa

Identifiers

PMID40329166
PMCPMC12054226

What Socratic holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.