Evidence map›Paper›PMID 40333587›Full record

ArticlePlant biotechnology journal2025

ESSENTIAL MEIOTIC ENDONUCLEASE 1 is required for chloroplast development and DNA repair in rice.

Yanxin Du, Yang Li, Weijiang Tang, Weiping Mo, Tingting Ma, Rongcheng Lin

Abstract read
In one paragraph

Article in Plant biotechnology journal, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Yanxin Du *Key Laboratory of Photobiology, Institute of Botany, Chinese Academy of Sciences, Beijing, China.
Yang Li *Key Laboratory of Photobiology, Institute of Botany, Chinese Academy of Sciences, Beijing, China.
Weijiang TangKey Laboratory of Photobiology, Institute of Botany, Chinese Academy of Sciences, Beijing, China.
Weiping MoKey Laboratory of Photobiology, Institute of Botany, Chinese Academy of Sciences, Beijing, China.
Tingting MaKey Laboratory of Photobiology, Institute of Botany, Chinese Academy of Sciences, Beijing, China.
Rongcheng LinKey Laboratory of Photobiology, Institute of Botany, Chinese Academy of Sciences, Beijing, China.ORCID https://orcid.org/0000-0001-8346-3390

Funding

Key Research and Development Program of Zhejiang Province 2024SSYS0100National Key Research and Development Program of China 2020YFA0907601National Natural Science Foundation of China 32030009
6 · The paper itself

Abstract

Chloroplast development is fundamental to photosynthesis and plant growth but is sensitive to environmental stress. Chloroplast development and division require genome stability and DNA repair, but the underlying mechanisms have been unclear. Using a forward genetic approach, we identified the striped-leaf mutant k48 in the rice (Oryza sativa L. japonica) cultivar KY131 background. k48 displayed defects in chloroplast development and photosynthesis, especially under high-light conditions. Genetic and complementation studies revealed that the loss of ESSENTIAL MEIOTIC ENDONUCLEASE 1 (EME1) is responsible for the defects in k48. Transcriptomic analysis showed that OsEME1 globally regulates the expression of genes involved in photosynthesis and DNA repair. Furthermore, mutations in OsEME1 led to cell cycle arrest and a DNA damage response. An in vitro endonuclease activity assay indicated that OsEME1 directly binds to and cleaves DNA substrates with a specific structure and that four conserved amino acids are required for its activity. Notably, OsEME1 targeted DNA fragments of rice GOLDEN-LIKE 1 (GLK1) and GLK2. We also demonstrated that OsEME1 interacts with the structure-specific endonuclease methyl methanesulfonate (MMS) and UV-SENSITIVE PROTEIN 81 (MUS81). This study highlights the role of OsEME1 in regulating chloroplast development by modulating homologous recombination repair in response to damage to double-stranded DNA.

Indexed as

ChloroplastsDNA RepairEndonucleasesOryzaPlant ProteinsGene Expression Regulation, PlantMutationPhotosynthesisEndonucleasesPlant Proteinschloroplast developmentDNA repairrice

Identifiers

PMID40333587
PMCPMC12205872

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.