Evidence map›Paper›PMID 40337332›Full record

ArticleERJ open research2025

A network of pro-inflammatory genes repressed by clock signalling in bronchial epithelium.

Xiaopeng Li, Karthi Srikanthan, Siti Farah Rahmawati, Dirk-Jan Slebos, Pallav L Shah, Philip J Johnson, Loes E M Kistemaker, Anika Nagelkerke, Reinoud Gosens

Abstract read
In one paragraph

Article in ERJ open research, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Article
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  4. Review
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Xiaopeng LiDepartment of Molecular Pharmacology, Groningen Research Institute of Pharmacy, University of Groningen, Groningen, the Netherlands.ORCID https://orcid.org/0000-0003-1900-2017
Karthi SrikanthanDepartment of Respiratory Medicine, Royal Brompton Hospital, London, UK.ORCID https://orcid.org/0000-0002-6751-5020
Siti Farah RahmawatiDepartment of Pharmacology and Clinical Pharmacy, Institut Teknologi Bandung, Bandung, Indonesia.
Dirk-Jan SlebosGroningen Research Institute for Asthma and COPD, University Medical Center Groningen, Groningen, the Netherlands.ORCID https://orcid.org/0000-0001-9555-3422
Pallav L ShahDepartment of Respiratory Medicine, Royal Brompton Hospital, London, UK.ORCID https://orcid.org/0000-0002-9052-4638
Philip J JohnsonNuvaira, Inc., Maple Grove, MN, USA.
Loes E M KistemakerAquilo BV, Groningen, the Netherlands.
Anika NagelkerkeDepartment of Pharmaceutical Analysis, Groningen Research Institute of Pharmacy, University of Groningen, Groningen, the Netherlands.
Reinoud GosensDepartment of Molecular Pharmacology, Groningen Research Institute of Pharmacy, University of Groningen, Groningen, the Netherlands.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: Circadian rhythms are biological cycles that regulate various physiological processes, including immune responses, tissue repair and oxidative stress. Previous studies indicated a role for distorted circadian signalling in COPD. Methods: In this study, we performed an unbiased analysis of the gene network that coexpressed with circadian clock signalling in COPD using weighted gene coexpression network analysis on RNA sequencing data from bronchial brushes of COPD patients. Results: We found that a large network of pro-inflammatory genes, including Conclusions: Our results provide an unbiased and comprehensive analysis of the gene expression network coexpressed with circadian clock signalling in bronchial epithelium. Our findings suggest an association between circadian clock signalling and enhanced inflammatory gene expression in COPD patients.

Identifiers

PMID40337332
PMCPMC12053922

What Socratic holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.