Evidence mapPaperPMID 40340756Full record

ArticleGenome medicine2025

Early-life and concurrent predictors of the healthy adolescent microbiome in a cohort study.

Hannah E Laue, Amy D Willis, Fang Wang, Melinda C MacDougall, Yingying Xu, Margaret R Karagas, Juliette C Madan, Abby F Fleisch, Bruce P Lanphear, Kim M Cecil and 4 more

Abstract read
In one paragraph

Article in Genome medicine, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Hannah E LaueDepartment of Biostatistics and Epidemiology, University of Massachusetts Amherst School of Public Health and Health Sciences, 715 N. Pleasant Street, Arnold House 429, Amherst, MA, 01003, USA. hlaue@umass.edu.
Amy D WillisDepartment of Biostatistics, University of Washington Hans Rosling Center for Population Health, 3980 15 Avenue NE, Box 351617, Seattle, WA, 98195-1617, USA.
Fang WangDepartment of Environmental Health Sciences, Columbia Mailman School of Public Health, 630 W 168th St, P&S 16-416, New York, NY, 10032, USA.
Melinda C MacDougallDivision of General and Community Pediatrics, Cincinnati Children's Hospital Medical Center, 3333 Burnet Ave, Cincinnati, OH, 45229, USA.
Yingying XuDivision of General and Community Pediatrics, Cincinnati Children's Hospital Medical Center, 3333 Burnet Ave, Cincinnati, OH, 45229, USA.
Margaret R KaragasDepartment of Epidemiology, Dartmouth Geisel School of Medicine, One Medical Center Dr Lebanon, Lebanon, NH, 03756, USA.
Juliette C MadanDepartment of Epidemiology, Dartmouth Geisel School of Medicine, One Medical Center Dr Lebanon, Lebanon, NH, 03756, USA.
Abby F FleischCenter for Interdisciplinary and Population Health Research, Maine Institute for Research, Westbrook, ME, USA.
Bruce P LanphearFaculty of Health Sciences, Simon Fraser University, Blusson Hall, 8888 University Dr, Burnaby, BC, Canada.
Kim M CecilDivision of General and Community Pediatrics, Cincinnati Children's Hospital Medical Center, 3333 Burnet Ave, Cincinnati, OH, 45229, USA.
Kimberly YoltonDivision of General and Community Pediatrics, Cincinnati Children's Hospital Medical Center, 3333 Burnet Ave, Cincinnati, OH, 45229, USA.
Aimin ChenDepartment of Biostatistics, Epidemiology and Informatics, University of Pennsylvania Perelman School of Medicine, 423 Guardian Drive, Philadelphia, PA, 19104, USA.
Jessie P BuckleyDepartment of Epidemiology, University of North Carolina at Chapel Hill, 2106-B McGavran-Greenberg Hall CB#7435, Chapel Hill, NC, 27599, USA.
Joseph M BraunDepartment of Epidemiology, Brown University, 121 S Main St, Providence, RI, USA.

Funding

Study of Prevalent Neurotoxicants in ChildrenP01ES011261 · CHILDREN'S HOSPITAL MED CTR (CINCINNATI) · 2001 to 2005
$5.6M
Translational Research Support CoreP30ES013508 · UNIVERSITY OF PENNSYLVANIA · 2025 to 2025
$1.6M
Triclosan, pubertal hormones, and the gut microbiome: implications for neurobehaviorR00ES034086 · UNIVERSITY OF MASSACHUSETTS AMHERST · 2025 to 2025
$494k
Statistical methods to enhance reproducible microbiome discoveryR35GM133420 · UNIVERSITY OF WASHINGTON · 2025 to 2025
$405k
Triclosan, pubertal hormones, and the gut microbiome: implications for neurobehaviorK99ES034086 · NIEHS · DARTMOUTH COLLEGE · PI Hannah Elizabeth Laue · 2024 to 2024
$110k
National Institute of Environmental Health Sciences,United States K99/R00ES034086 , P01ES011261, R01ES0272244, R01ES025214NCATS NIH HHS UL1 TR001425NCATS NIH HHS UL1TR001425NIEHS NIH HHS K99 ES034086NIEHS NIH HHS P01 ES011261NIEHS NIH HHS P30 ES013508NIEHS NIH HHS R00 ES034086NIEHS NIH HHS R01 ES025214NIGMS NIH HHS R35 GM133420NIGMS NIH HHS R35GM133420
6 · The paper itself

Abstract

backgroundThe microbiome of adolescents is poorly understood, as are factors influencing its composition. We aimed to describe the healthy adolescent microbiome and identify early-life and concurrent predictors of its composition.

methodsWe performed metagenomic sequencing of 247 fecal specimens from 167 adolescents aged 11-14 years participating in the Health Outcomes and Measures of the Environment (HOME) Study, a longitudinal pregnancy and birth cohort (Cincinnati, OH). We described common features of the adolescent gut microbiome and applied self-organizing maps (SOMs)-a machine-learning approach-to identify distinct microbial profiles (n = 4). Using prospectively collected data on sociodemographic characteristics, lifestyle, diet, and sexual maturation, we identified early-life and concurrent factors associated with microbial diversity and phylum relative abundance with linear regression models and composition with Kruskal-Wallis and Fisher's exact tests.

resultsWe found that household income and other sociodemographic factors were consistent predictors of the microbiome, with higher income associated with lower diversity and differential relative abundances of Firmicutes (increased) and Actinobacteria (decreased). Sexual maturation, distinct from chronological age, was related to higher diversity in females and differences in phylum relative abundances and compositional profiles in both males and females.

conclusionsOur study suggests that adolescence is a unique window for gut microbial composition and that it may be shaped by both early-life and concurrent exposures, highlighting its potential in future epidemiologic research.

Indexed as

Gastrointestinal MicrobiomeAdolescentChildCohort StudiesFecesFemaleHumansMaleMetagenomicsAdolescenceGut microbiomeMetagenomicsSelf-organizing maps

Identifiers

PMID40340756
PMCPMC12060534

What Socratic holds

Textmetadata
LicenceCC BY-NC-ND
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.