Evidence map›Paper›PMID 40340820›Full record

ArticleBMC plant biology2025

Transcriptome analysis and genome-wide identification of WRKY gene family in Leonurus japonicus under drought stress.

Tongtong Guo, Qing Wang, Yuxiao Yi, Zelin Yin, Lili Xu, Fengtang Yang, Jianing Xu, Ming Zhang

Abstract read
In one paragraph

Article in BMC plant biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Tongtong Guo *School of Life Sciences and Medicine, Shandong University of Technology, Zibo, 255000, Shandong, China.
Qing Wang *School of Life Sciences and Medicine, Shandong University of Technology, Zibo, 255000, Shandong, China.
Yuxiao YiSchool of Life Sciences and Medicine, Shandong University of Technology, Zibo, 255000, Shandong, China.
Zelin YinSchool of Life Sciences and Medicine, Shandong University of Technology, Zibo, 255000, Shandong, China.
Lili XuSchool of Life Sciences and Medicine, Shandong University of Technology, Zibo, 255000, Shandong, China.
Fengtang YangSchool of Life Sciences and Medicine, Shandong University of Technology, Zibo, 255000, Shandong, China. fengtangyang@163.com.
Jianing XuSchool of Life Sciences and Medicine, Shandong University of Technology, Zibo, 255000, Shandong, China. xujianing1219@126.com.
Ming ZhangCollege of Agriculture and Bioengineering (Peony College), Heze University, Heze, 274015, Shandong, China. zhangming@hezeu.edu.cn.

Funding

National Natural Science Foundation of China Grant Nos. 12105163, 32001987Natural Science Foundation of Shandong Province Grant Nos. ZR2020QD133, ZR2020MC142Natural Science Foundation of Shandong Province No. ZR2021QC197
6 · The paper itself

Abstract

backgroundLeonurus japonicus (L. japonicus) is a herbaceous flowering plant, widely distributed in Asia. Drought is one of the primary environmental stress factors affecting L. japonicus growth. Previous studies have demonstrated that WRKY transcription factors (TFs) play a crucial role in plant responses to drought stress. So far, there has been no research on the function of WRKY genes in L. japonicus.

resultsThe physiological experiment results showed that drought stress significantly increased the malondialdehyde (MDA), proline, and hydrogen peroxide (H₂O₂) content of L. japonicus. Transcriptome analysis revealed significant changes in the expression levels of the WRKY gene family. Based on bioinformatics analysis, 67 WRKY genes (LjWRKYs) were identified in the genome of L. japonicus, with amino acid lengths ranging from 85 to 574. The LjWRKYs can be divided into three subfamilies. Among them, the expression of LjWRKY (1/4/23/44) were significantly up-regulated under drought stress, whereas the expression of LjWRKY (21/25/65) were significantly down-regulated. Additionally, Kyoto Encyclopedia of Genes and Genomes (KEGG) analysis indicated that after drought stress, differentially expressed genes (DEGs) were enriched in plant hormone signal transduction pathway, the MAPK signaling pathway and biosynthesis of secondary metabolites pathway. In the MAPK pathway, there were 19 DEGs, 9 of which contained W-box regions, suggesting that they may be potential regulatory targets of LjWRKY TFs under drought stress.

conclusionThese findings suggested that WRKY gene family may participate in the response to drought stress in L. japonicus. This study provides a scientific basis for the further development and functional validation of the WRKY gene family in L. japonicus. CLINICAL TRIAL NUMBER: Not applicable.

Indexed as

DroughtsLeonurusPlant ProteinsTranscription FactorsGene Expression ProfilingGene Expression Regulation, PlantGenome, PlantMultigene FamilyPhylogenyStress, PhysiologicalPlant ProteinsTranscription FactorsDrought stressGenome-wide analysisLeonurus japonicusWRKY family

Identifiers

PMID40340820
PMCPMC12063297

What Socratic holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.