Evidence map›Paper›PMID 40354355›Full record

ArticlePloS one2025

First identification of ORF virus causing contagious ecthyma in Morocco (MOR20): Genomic, phylogenetic, and sequence variants analyses for vaccine design.

Zouhair Elkarhat, Ikram Tifrouin, Zahra Bamouh, Khalid Omari Tadlaoui, Mehdi Elharrak

Abstract read
In one paragraph

Article in PloS one, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Zouhair ElkarhatResearch and Development, MCI Santé Animale, Mohammedia, Morocco.ORCID https://orcid.org/0000-0002-6778-380X
Ikram TifrouinResearch and Development, MCI Santé Animale, Mohammedia, Morocco.
Zahra BamouhResearch and Development, MCI Santé Animale, Mohammedia, Morocco.
Khalid Omari TadlaouiResearch and Development, MCI Santé Animale, Mohammedia, Morocco.
Mehdi ElharrakResearch and Development, MCI Santé Animale, Mohammedia, Morocco.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The ORF virus induces a zoonotic contagious ecthyma disease, affecting small ruminants such as sheep and goats. ORF virus has not been identified in Morocco, and there is no vaccination protocol against contagious ecthyma. In this study, we analyzed the genome sequence of a new strain isolated in Morocco (MOR20) from a flock of sheep showing suspicious signs of Sheepox virus infection. ORFV MOR20 strain was isolated after 2 initial blind passages on Heart cells. The cytopathic effect was characterized by aggregation, swelling and detachment of cells, appearing 4 days after infection. The virus was harvested on day 6 pi with a titer of 107.2 TCID/ml. ORFV MOR20 was sequenced using the Illumina NovaSeq 6000 platform. After employing several bioinformatics tools, we identified that ORFV MOR20 shares 98.59% similarity with the TVL strain virus, which is used in a commercial live vaccine. Additionally, We aligned 33 ORFV genomic sequences with MOR20 sequences and visualized the pairwise comparisons using a Heat Map. ORFV was classified into two genetic groups: those isolated from sheep and those from goats. This was confirmed by a phylogenetic tree. Furthermore, we analyzed genetic variants identified in the MOR20 strain in comparison with ORFV TVL strain and found 636 sequence variants. Some genes, such as ORFV086, ORFV112, and ORFV132, have a particularly high number of sequence variants. All in all, ORFV MOR20 isolate represents a promising candidate for further studies aimed at developing a standardized vaccine against contagious ecthyma.

Indexed as

Ecthyma, ContagiousGenome, ViralOrf virusViral VaccinesAnimalsGenetic VariationGenomicsGoatsMoroccoPhylogenySheepViral Vaccines

Identifiers

PMID40354355
PMCPMC12068574

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.