Evidence map›Paper›PMID 40358701›Full record

ArticleAnnals of hematology2025

Clinical usefulness of next-generation sequencing-based target gene sequencing in diagnosis of inherited bone marrow failure syndrome.

Young Dai Kwon, Kyung Taek Hong, Juyeon Lee, Yoon Sunwoo, Yeseul Kim, Sung Im Cho, Hyun Jin Park, Bo Kyung Kim, Jee-Soo Lee, Jung Yoon Choi and 2 more

Abstract read
In one paragraph

Article in Annals of hematology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Young Dai KwonDepartment of Pediatrics, Seoul National University College of Medicine, Seoul, Korea, 101, Daehak-ro, Jongno-gu, Seoul, 03080, Republic of Korea.ORCID http://orcid.org/0000-0001-9051-5937
Kyung Taek HongDepartment of Pediatrics, Seoul National University College of Medicine, Seoul, Korea, 101, Daehak-ro, Jongno-gu, Seoul, 03080, Republic of Korea. hongkt@snu.ac.kr.ORCID http://orcid.org/0000-0002-8822-1988
Juyeon LeeDepartment of Pediatrics, Seoul National University College of Medicine, Seoul, Korea, 101, Daehak-ro, Jongno-gu, Seoul, 03080, Republic of Korea.ORCID http://orcid.org/0000-0001-7900-5936
Yoon SunwooDepartment of Pediatrics, Seoul National University College of Medicine, Seoul, Korea, 101, Daehak-ro, Jongno-gu, Seoul, 03080, Republic of Korea.ORCID http://orcid.org/0000-0001-7444-7823
Yeseul KimDepartment of Laboratory Medicine, Seoul National University Hospital, Seoul National University College of Medicine, Seoul, Republic of Korea.ORCID http://orcid.org/0000-0002-6870-9214
Sung Im ChoDepartment of Laboratory Medicine, Seoul National University Hospital, Seoul National University College of Medicine, Seoul, Republic of Korea.ORCID http://orcid.org/0000-0002-3819-8046
Hyun Jin ParkDepartment of Pediatrics, Seoul National University College of Medicine, Seoul, Korea, 101, Daehak-ro, Jongno-gu, Seoul, 03080, Republic of Korea.ORCID http://orcid.org/0000-0001-7062-0414
Bo Kyung KimDepartment of Pediatrics, Seoul National University College of Medicine, Seoul, Korea, 101, Daehak-ro, Jongno-gu, Seoul, 03080, Republic of Korea.ORCID http://orcid.org/0000-0003-4671-0449
Jee-Soo LeeDepartment of Laboratory Medicine, Seoul National University Hospital, Seoul National University College of Medicine, Seoul, Republic of Korea.ORCID http://orcid.org/0000-0002-6633-4631
Jung Yoon ChoiDepartment of Pediatrics, Seoul National University College of Medicine, Seoul, Korea, 101, Daehak-ro, Jongno-gu, Seoul, 03080, Republic of Korea.ORCID http://orcid.org/0000-0001-8758-3074
Moon-Woo SeongSeoul National University Cancer Research Institute, Seoul, Republic of Korea.ORCID http://orcid.org/0000-0003-2954-3677
Hyoung Jin KangDepartment of Pediatrics, Seoul National University College of Medicine, Seoul, Korea, 101, Daehak-ro, Jongno-gu, Seoul, 03080, Republic of Korea.ORCID http://orcid.org/0000-0003-1009-6002

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Inherited bone marrow failure syndromes are genetic hematologic disorders with increased cancer risk. Accurate diagnosis is crucial for appropriate management. This study assessed the clinical usefulness of next-generation sequencing (NGS)-based target gene sequencing in pediatric and AYA (adolescent and young adult) patients with hematologic abnormalities. From December 2019 to June 2023, 93 patients with suspected congenital hematologic diseases at a single institution underwent NGS-based testing. Medical records were retrospectively reviewed. The median age at diagnosis was 9.3 years (range 0.2-31.4), with 59.1% males. Indications for testing included specific medical histories (28 patients), persistent cytopenia or recurrent neutropenic fever (22 patients), changes in cytopenia patterns (11 patients), and other reasons (32 patients). Pathogenic variants were identified in 9/28 (32.1%), 3/22 (13.6%), 4/11 (36.4%), and 0/32 (0%). Overall, 16 patients (17.2%) had pathogenic variants, including FANCA, BRCA2, PMS2, ELANE, G6PC3 and VPS13B in patients with idiopathic neutropenia, and GATA2 in patients with suspected myelodysplastic syndrome. Genetic findings led to diagnostic revisions in 12 patients (12.9%), including reclassification of aplastic anemia (AA) as Fanconi anemia, Diamond-Blackfan anemia, or Shwachman-Diamond syndrome, prompting hematopoietic stem cell transplantation and altering cancer surveillance. Pathogenic variants were more frequently observed in patients with a specific medical history or changes in cytopenia, and in those with additional clinical features (cytogenetic abnormalities or non-severe AA). This study demonstrated the diagnostic usefulness of NGS-based target gene sequencing for pediatric and AYA patients with suspected genetic hematologic disorders, supporting the need for multicenter studies and standardized guideline development.

Indexed as

Bone Marrow DiseasesBone Marrow Failure DisordersHemoglobinuria, ParoxysmalHigh-Throughput Nucleotide SequencingAdolescentAdultAnemia, AplasticChildChild, PreschoolFemaleHumansInfantMaleRetrospective StudiesYoung AdultCytopeniaInherited bone marrow failure syndromeNext-generation sequencing

Identifiers

PMID40358701
PMCPMC12141389

What Socratic holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.