Evidence map›Paper›PMID 40362307›Full record

ArticleInternational journal of molecular sciences2025

Shortened PGLYRP1 Peptides Regulate Antitumor Activity of Cytotoxic Lymphocytes via TREM-1 Receptor: From Biology to Bioinformatics.

Daria M Yurkina, Kirill A Shcherbakov, Elena A Romanova, Anna V Tvorogova, Alexey M Feoktistov, Georgii P Georgiev, Denis V Yashin, Lidia P Sashchenko

Abstract read
In one paragraph

Article in International journal of molecular sciences, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Daria M YurkinaInstitute of Gene Biology (RAS), 119334 Moscow, Russia.ORCID 0009-0003-8367-5133
Kirill A ShcherbakovInstitute of Gene Biology (RAS), 119334 Moscow, Russia.
Elena A RomanovaInstitute of Gene Biology (RAS), 119334 Moscow, Russia.
Anna V TvorogovaInstitute of Gene Biology (RAS), 119334 Moscow, Russia.
Alexey M FeoktistovInstitute of Gene Biology (RAS), 119334 Moscow, Russia.
Georgii P GeorgievInstitute of Gene Biology (RAS), 119334 Moscow, Russia.
Denis V YashinInstitute of Gene Biology (RAS), 119334 Moscow, Russia.
Lidia P SashchenkoInstitute of Gene Biology (RAS), 119334 Moscow, Russia.

Funding

Russian Science Foundation Grant 23-14-00076
6 · The paper itself

Abstract

The pro-inflammatory immune response plays an important role in protecting the body from pathogens and tumors. In this study, we were able to identify three peptides of the innate immunity protein PGLYRP1 (Tag7) that could regulate the activity of the TREM-1 receptor. TREM-1 receptor activation on monocytes triggers the appearance of antitumor lymphocytes. All three peptides studied (17.0, N9, and N15) bind with the TREM-1 receptor with the Kds 1.32 ± 0.2 nM, 9.66 ± 0.5 nM, and 7.43 ± 0.4 nM, respectively. An N9 peptide inhibiting the activity of the receptor was identified in addition to two peptides (N9 and N15) that jointly trigger the activation of the receptor. The conducted molecular docking study revealed amino acid residues (Ile57, Ile58, Glu106, Ser108, Leu110, Tyr116, Pro118, Pro119, Arg130, and Val 132), necessary for various functions of peptides, providing important knowledge for understanding the mechanism of activation of this receptor that can also serve as a basis for the development of therapeutic drugs to regulate its activity in the treatment of autoimmune diseases and tumors.

Indexed as

PeptidesT-Lymphocytes, CytotoxicTriggering Receptor Expressed on Myeloid Cells-1Computational BiologyCytokinesHumansMolecular Docking SimulationProtein BindingCytokinesPeptidesPGLYRP1 protein, humanTREM1 protein, humanTriggering Receptor Expressed on Myeloid Cells-1antitumor activitycytotoxicitymolecular dockingpeptidesPGLYRP1receptor activationTREM-1

Identifiers

PMID40362307
PMCPMC12071940

What Socratic holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.