Evidence map›Paper›PMID 40366584›Full record

ArticleMethods in molecular biology (Clifton, N.J.)2025

Analysis of Pectins, Extensins, and Hemicelluloses in Abscission Zones.

Emilia Wilmowicz, Agata Kućko, Jacek Karwaszewski

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Article in Methods in molecular biology (Clifton, N.J.), 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
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0citing papers in PubMed
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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Emilia WilmowiczFaculty of Biological and Veterinary Sciences, Nicolaus Copernicus University, Toruń, Poland. emwil@umk.pl.
Agata KućkoDepartment of Plant Physiology, Institute of Biology, Warsaw University of Life Sciences-SGGW, Warsaw, Poland.
Jacek KarwaszewskiFaculty of Biological and Veterinary Sciences, Nicolaus Copernicus University, Toruń, Poland.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Plant organ detachment occurs through the activation of specific, highly specialized cells, named the abscission zone (AZ). Molecular and biochemical transformations are induced in this specific tissue region that lead to the loosening of the cell walls, middle lamellae dissolution, and, as a consequence, the separation of the organ from the maternal plant. Understanding the mechanisms of AZ activation requires elucidating changes in the composition of cell walls following abscission. In this chapter, we present a protocol developed for flower lupine AZ analyses that can be used to study the AZs of different organs formed in various species. The procedure outlines the proper excision of biological material, particularly the successful AZ collection and the preparation for cross-sectioning. Furthermore, tissue fixation, dehydration, saturation with resin, and sectioning are thoroughly described. A detailed methodology for the immunocytochemical reactions using antibodies to perform a dot-blot assay, as well as the localization of pectins, extensins, and hemicelluloses in the AZ with the fluorescence microscope is provided. This comprehensive protocol provides a basis to elucidate which cell wall components are modified to determine the timing of organ separation.

Indexed as

FlowersLupinusPectinsPlant ProteinsPolysaccharidesCell WallImmunohistochemistryMicroscopy, FluorescenceTissue FixationhemicellulosePectinsPlant ProteinsPolysaccharidesAbscission zoneAntibodiesCell wallFluorescence microscopyImmuno-Dot blot assayImmunoglobulinImmunolocalizationNitrocellulose membraneOrgan abscission

Identifiers

What Socratic holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.