Evidence map›Paper›PMID 40369394›Full record

ArticleDigestive diseases and sciences2025

Genetic Background of Eosinophilic Esophagitis and Esophageal Atresia in Children.

Ipek Ulkersoy, Ahsen Colakoglu, Eymen Pinar, Ece Kuduban, Erkan Akkus, Oguzhan Tin, Nursena Kologlu Ates, Khusan Khodzhaev, Hilal Keskin Karakoyun, Ceyhan Sayar and 5 more

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Article in Digestive diseases and sciences, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Eosinophilic Esophagitis in the Middle East: Insight From a Comprehensive Systematic Review.JGH open : an open access journal of gastroenterology and hepatology · 2026
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Ipek UlkersoyDepartment of Pediatric Gastroenterology, Hepatology and Nutrition, Cerrahpasa Faculty of Medicine, Istanbul University-Cerrahpasa, Istanbul, Turkey. ipek.ulkersoy@iuc.edu.tr.ORCID http://orcid.org/0000-0002-4517-0148
Ahsen ColakogluDepartment of Pediatrics, Cerrahpasa Faculty of Medicine, Istanbul University-Cerrahpasa, Istanbul, Turkey.ORCID http://orcid.org/0009-0003-8436-8581
Eymen PinarDepartment of Pediatrics, Cerrahpasa Faculty of Medicine, Istanbul University-Cerrahpasa, Istanbul, Turkey.ORCID http://orcid.org/0000-0002-5466-0915
Ece KudubanDepartment of Pediatrics, Cerrahpasa Faculty of Medicine, Istanbul University-Cerrahpasa, Istanbul, Turkey.ORCID http://orcid.org/0009-0004-4018-2176
Erkan AkkusDepartment of Pediatric Gastroenterology, Hepatology and Nutrition, Cerrahpasa Faculty of Medicine, Istanbul University-Cerrahpasa, Istanbul, Turkey.ORCID http://orcid.org/0000-0002-3744-7389
Oguzhan TinDepartment of Pediatric Gastroenterology, Hepatology and Nutrition, Cerrahpasa Faculty of Medicine, Istanbul University-Cerrahpasa, Istanbul, Turkey.ORCID http://orcid.org/0000-0002-2057-5085
Nursena Kologlu AtesDepartment of Pediatric Gastroenterology, Hepatology and Nutrition, Cerrahpasa Faculty of Medicine, Istanbul University-Cerrahpasa, Istanbul, Turkey.ORCID http://orcid.org/0000-0003-2227-5200
Khusan KhodzhaevDepartment of Molecular Biology and Genetics, Sapiens Genetics Diagnostic Center, Istanbul, Turkey.ORCID http://orcid.org/0000-0001-8008-7553
Hilal Keskin KarakoyunDepartment of Molecular Biology and Genetics, Sapiens Genetics Diagnostic Center, Istanbul, Turkey.ORCID http://orcid.org/0000-0001-6886-3986
Ceyhan SayarDepartment of Medical Genetics, Sapiens Genetics Diagnostic Center, Istanbul, Turkey.ORCID http://orcid.org/0000-0002-0453-2851
Nuray KepilDepartment of Pathology, Cerrahpasa Faculty of Medicine, Istanbul University-Cerrahpasa, Istanbul, Turkey.ORCID http://orcid.org/0000-0001-5494-6422
Kanay YararbasDepartment of Medical Genetics, Sapiens Genetics Diagnostic Center, Istanbul, Turkey.ORCID http://orcid.org/0000-0002-5314-3406
Omer Faruk BeserDepartment of Pediatric Gastroenterology, Hepatology and Nutrition, Cerrahpasa Faculty of Medicine, Istanbul University-Cerrahpasa, Istanbul, Turkey.ORCID http://orcid.org/0000-0003-1927-7256
Haluk CokugrasDepartment of Pediatric Allergy and Immunology, Cerrahpasa Faculty of Medicine, Istanbul University-Cerrahpasa, Istanbul, Turkey.ORCID http://orcid.org/0000-0002-0086-3936
Fugen Cullu CokugrasDepartment of Pediatric Gastroenterology, Hepatology and Nutrition, Demiroglu Bilim University Faculty of Medicine, Istanbul, Turkey.ORCID http://orcid.org/0000-0003-0886-1422

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

BACKGROUND AND

aimsThe pathophysiology of eosinophilic esophagitis (EoE) is associated with a strong heritability and esophageal-specific genetic variants. Patients with esophageal atresia (EA) may be at higher risk of developing EoE considering the recently discovered genetic similarities between these disorders. This study aimed to identify genetic mutations associated with EoE, explore their potential role in susceptibility to concurrent EA, and evaluate the relationship between these mutations, clinical course, and treatment response.

methodsWhole-exome sequencing was performed to identify the potential genomic regions associated with an increased risk of these disorders, and the analysis was expanded for candidate genes.

resultsA total of 35 cases (EA + EoE +; n = 7) were included. Pathogenic mutations in genes associated with EoE were identified in 2 cases, while likely pathogenic variants were identified in 5 cases. No polymorphisms were detected in 5 cases. Variants of uncertain significance (VUS) were identified in genes associated with EoE in 18 cases and in candidate genes in 7 cases. Patients with VUS exhibited a high percentage of associated EA, increased rates of atopy, and a notable response to treatment. The duration of the clinical response was significantly longer in individuals without genetic mutations (p-value:0.006). Among the isolated EoE cases, 50% had variants in genes previously associated with EoE, whereas in EA + EoE + cases, this rate increased to 71%, suggesting a stronger genetic predisposition in EA + EoE + cases.

conclusionOur study highlights the role of genetic mutations in the etiology of EoE. The identification of novel gene variants and new insights into etiopathogenesis are anticipated to enhance diagnosis, screening, and treatment strategies.

Indexed as

Eosinophilic EsophagitisEsophageal AtresiaMutationAdolescentChildChild, PreschoolExome SequencingFemaleGenetic Predisposition to DiseaseHumansInfantMaleEosinophilic esophagitisEsophageal atresiaFunctional analysisWhole-exome sequencing

Identifiers

What Socratic holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.