Evidence map›Paper›PMID 40369563›Full record

ArticleMicrobial cell factories2025

Genome mining, structural elucidation and surface-active property of a new lipopeptide from Bacillus subtilis.

Wan-Qi Qin, Yi-Fan Liu, Lei Zhou, Jin-Feng Liu, Dan Fei, Ke-Heng Xiang, Shi-Zhong Yang, Ji-Dong Gu, Bo-Zhong Mu

Abstract read
In one paragraph

Article in Microbial cell factories, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Review
  6. Self-Assembly of a Therapeutic Peptide Surfactant: A Small-Angle X-ray Scattering Study.Langmuir : the ACS journal of surfaces and colloids · 2026
    Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Wan-Qi QinState Key Laboratory of Bioreactor Engineering, School of Chemistry and Molecular Engineering, East China University of Science and Technology, Shanghai, 200237, P.R. China.
Yi-Fan LiuState Key Laboratory of Bioreactor Engineering, School of Chemistry and Molecular Engineering, East China University of Science and Technology, Shanghai, 200237, P.R. China.
Lei ZhouState Key Laboratory of Bioreactor Engineering, School of Chemistry and Molecular Engineering, East China University of Science and Technology, Shanghai, 200237, P.R. China.
Jin-Feng LiuDaqing Huali Biotechnology Co., Ltd, Daqing, Heilongjiang, 163511, P. R. China.
Dan FeiInstitute of Quality Safety and Standards of Agricultural Products, Jiangxi Academy of Agricultural Sciences, Nanchang, Jiangxi, 330200, P. R. China.
Ke-Heng XiangState Key Laboratory of Bioreactor Engineering, School of Chemistry and Molecular Engineering, East China University of Science and Technology, Shanghai, 200237, P.R. China.
Shi-Zhong YangState Key Laboratory of Bioreactor Engineering, School of Chemistry and Molecular Engineering, East China University of Science and Technology, Shanghai, 200237, P.R. China.
Ji-Dong GuEnvironmental Science and Engineering Group, Guangdong Technion Israel Institute of Technology, 241 Daxue Road, Shantou, Guangdong, 515063, P.R. China.
Bo-Zhong MuState Key Laboratory of Bioreactor Engineering, School of Chemistry and Molecular Engineering, East China University of Science and Technology, Shanghai, 200237, P.R. China. bzmu@ecust.edu.cn.

Funding

Fundamental Research Funds for the Central Universities 22221818014National Key Research and Development Program of China 2022YFC2105200
6 · The paper itself

Abstract

backgroundThe Bacillus genus is well known for producing structurally diverse lipopeptides, many of which exhibit remarkable surface-active and bioactive properties, such as surfactin and daptomycin. In recent years, genome mining has emerged as an effective tool for the discovery of novel natural products by predicting biosynthetic gene clusters and linking them to secondary metabolite production. However, the full biosynthetic potential of many Bacillus subtilis strains remains unexplored. Therefore, this study aimed to investigate the biosynthetic potential of an oilfield-isolated Bacillus subtilis strain through genome mining, with the goal of identifying novel lipopeptides with enhanced surface activity.

resultsIn this study, we identified 14 biosynthetic gene clusters, four of which were related to lipopeptide biosynthesis. In addition, a lipopeptide was characterized as a new member of the surfactin family, namely surfactin-C18. The primary structure of surfactin-C18 was determined to be a heptapeptide ring of N-Glu-Leu-Leu-Val-Asp-Leu-Leu-C linked to the longest β-hydroxy fatty acid in the surfactin family, containing 18 carbon atoms. Moreover, we investigated the surface activity of surfactin-C18, measuring its critical micelle concentration and the surface tension to be 1.99 µmol/L and 28.63 mN/m, respectively. The obtained adsorption parameters of surfactin-C18 at the air/liquid interface further explained its enhanced surface activity in comparison with other surfactin homologs and commercial surfactants.

conclusionsTo the best of our knowledge, this is the first report on the structural characterization and surface activity of surfactin-C18. In addition, our findings not only demonstrate the biosynthetic potential of B. subtilis but also highlight the power of the genome mining strategy for discovering novel lipopeptides with industrial applications.

Indexed as

Bacillus subtilisGenome, BacterialLipopeptidesSurface-Active AgentsMultigene FamilyPeptides, CyclicLipopeptidesPeptides, CyclicSurface-Active Agentssurfactin peptideBacillus subtilisGenome miningLipopeptideSurface activitySurfactin

Identifiers

PMID40369563
PMCPMC12076922

What Socratic holds

Textmetadata
LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.